Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 KRT17P1-201ENST00000399211 1546 ntBASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 AC137761.2-201ENST00000561729 223 ntBASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 AC145350.3-201ENST00000569033 163 ntBASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DUXBA0A1W2PPF3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 RAP2CP1-201ENST00000605103 478 ntBASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 AC231657.2-201ENST00000624556 255 ntBASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.54■□□□□ 0.08
DUXBA0A1W2PPF3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DUXBA0A1W2PPF3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms