Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AL161938.1-201ENST00000569833 2180 ntBASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AC074183.2-201ENST00000623112 922 ntBASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MST1L-201ENST00000442552 2185 ntBASIC11.94□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 STAC-204ENST00000457375 1366 ntTSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AC012317.2-201ENST00000623305 2251 ntBASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CLTA-206ENST00000466396 695 ntTSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ABHD17AP3-201ENST00000503096 1137 ntBASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 MADD-208ENST00000405573 1823 ntTSL 5 BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 AL031598.1-201ENST00000561511 1773 ntBASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
IGKV3D-7A0A0C4DH55 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms