Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AC026185.1-201ENST00000445748 174 ntBASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 AC126763.1-201ENST00000552015 2118 ntBASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 AC092368.3-202ENST00000574180 1591 ntBASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN6Q9Y6Q1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 TUBB8P6-201ENST00000436895 1288 ntBASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN6Q9Y6Q1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 GUSBP6-202ENST00000438529 1198 ntBASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN6Q9Y6Q1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN6Q9Y6Q1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms