Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 TMEM191A-211ENST00000637163 1067 ntBASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB1Q9Y5G3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
PCDHGB1Q9Y5G3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB1Q9Y5G3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB1Q9Y5G3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHGB1Q9Y5G3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 AL109923.1-201ENST00000618799 583 ntBASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 AL162741.1-201ENST00000565563 1558 ntBASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGB1Q9Y5G3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 KRT18P61-201ENST00000585825 1298 ntBASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 IRX1P1-201ENST00000438849 1838 ntBASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB1Q9Y5G3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGB1Q9Y5G3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms