Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS2Q99743 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.66■□□□□ 0.58
NPAS2Q99743 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.66■□□□□ 0.58
NPAS2Q99743 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.66■□□□□ 0.58
NPAS2Q99743 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS2Q99743 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS2Q99743 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NPAS2Q99743 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 WIZP1-201ENST00000531444 2299 ntBASIC18.65■□□□□ 0.58
NPAS2Q99743 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.65■□□□□ 0.58
NPAS2Q99743 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.65■□□□□ 0.58
NPAS2Q99743 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NPAS2Q99743 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 RN7SL471P-201ENST00000580476 299 ntBASIC18.65■□□□□ 0.58
NPAS2Q99743 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
NPAS2Q99743 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS2Q99743 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NPAS2Q99743 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS2Q99743 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NPAS2Q99743 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.64■□□□□ 0.58
NPAS2Q99743 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 AC135050.7-201ENST00000624508 2218 ntBASIC18.64■□□□□ 0.57
NPAS2Q99743 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.64■□□□□ 0.57
NPAS2Q99743 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 RPPH1-201ENST00000516869 333 ntBASIC18.64■□□□□ 0.57
NPAS2Q99743 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.64■□□□□ 0.57
NPAS2Q99743 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.64■□□□□ 0.57
NPAS2Q99743 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS2Q99743 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS2Q99743 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS2Q99743 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NPAS2Q99743 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS2Q99743 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS2Q99743 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
NPAS2Q99743 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.63■□□□□ 0.57
NPAS2Q99743 AC120498.8-201ENST00000614275 531 ntBASIC18.63■□□□□ 0.57
NPAS2Q99743 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NPAS2Q99743 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NPAS2Q99743 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS2Q99743 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
NPAS2Q99743 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NPAS2Q99743 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms