Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 UBE2DNL-204ENST00000602536 740 ntBASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TFP1-202ENST00000475455 1573 ntBASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 AC004854.2-201ENST00000608450 1441 ntBASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MYCNOS-205ENST00000641950 531 ntBASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMIM4Q8WVI0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 TERF1P5-201ENST00000477545 1207 ntBASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 AL031432.3-201ENST00000607698 485 ntBASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMIM4Q8WVI0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.29■□□□□ 0.2
SMIM4Q8WVI0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms