Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LDB1Q86U70 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LDB1Q86U70 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 AC004980.1-204ENST00000429707 299 ntBASIC19.04■□□□□ 0.64
LDB1Q86U70 TSPY23P-201ENST00000440136 739 ntBASIC19.04■□□□□ 0.64
LDB1Q86U70 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB1Q86U70 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB1Q86U70 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB1Q86U70 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB1Q86U70 AL445675.2-201ENST00000620291 557 ntBASIC19.04■□□□□ 0.64
LDB1Q86U70 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.04■□□□□ 0.64
LDB1Q86U70 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.04■□□□□ 0.64
LDB1Q86U70 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB1Q86U70 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.04■□□□□ 0.64
LDB1Q86U70 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LDB1Q86U70 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB1Q86U70 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB1Q86U70 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.03■□□□□ 0.64
LDB1Q86U70 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LDB1Q86U70 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 CR392000.1-201ENST00000624770 1228 ntBASIC19.03■□□□□ 0.64
LDB1Q86U70 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.03■□□□□ 0.64
LDB1Q86U70 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB1Q86U70 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB1Q86U70 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB1Q86U70 FEM1AP3-201ENST00000403722 1741 ntBASIC19.03■□□□□ 0.64
LDB1Q86U70 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.02■□□□□ 0.64
LDB1Q86U70 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
LDB1Q86U70 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LDB1Q86U70 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LDB1Q86U70 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB1Q86U70 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.02■□□□□ 0.64
LDB1Q86U70 GCSHP5-201ENST00000443090 522 ntBASIC19.02■□□□□ 0.64
LDB1Q86U70 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB1Q86U70 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB1Q86U70 AF186192.3-201ENST00000583427 947 ntBASIC19.02■□□□□ 0.64
LDB1Q86U70 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LDB1Q86U70 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDB1Q86U70 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDB1Q86U70 CROCCP3-202ENST00000420820 1947 ntBASIC19.02■□□□□ 0.63
LDB1Q86U70 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LDB1Q86U70 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LDB1Q86U70 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.01■□□□□ 0.63
LDB1Q86U70 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.01■□□□□ 0.63
LDB1Q86U70 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LDB1Q86U70 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.01■□□□□ 0.63
LDB1Q86U70 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.01■□□□□ 0.63
LDB1Q86U70 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LDB1Q86U70 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms