Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.82■□□□□ 0.92
CASP4P49662 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CASP4P49662 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.82■□□□□ 0.92
CASP4P49662 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.82■□□□□ 0.92
CASP4P49662 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
CASP4P49662 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.82■□□□□ 0.92
CASP4P49662 TSPY7P-201ENST00000431358 1114 ntBASIC20.82■□□□□ 0.92
CASP4P49662 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
CASP4P49662 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.82■□□□□ 0.92
CASP4P49662 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CASP4P49662 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.82■□□□□ 0.92
CASP4P49662 AC066615.1-201ENST00000640911 628 ntBASIC20.82■□□□□ 0.92
CASP4P49662 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASP4P49662 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CASP4P49662 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CASP4P49662 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CASP4P49662 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CASP4P49662 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CASP4P49662 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.81■□□□□ 0.92
CASP4P49662 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.81■□□□□ 0.92
CASP4P49662 AL020996.1-203ENST00000536896 2307 ntBASIC20.81■□□□□ 0.92
CASP4P49662 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.81■□□□□ 0.92
CASP4P49662 AC004951.3-201ENST00000418645 1148 ntBASIC20.81■□□□□ 0.92
CASP4P49662 B3GAT3P1-201ENST00000471720 806 ntBASIC20.81■□□□□ 0.92
CASP4P49662 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.81■□□□□ 0.92
CASP4P49662 AC026271.3-201ENST00000571884 352 ntBASIC20.81■□□□□ 0.92
CASP4P49662 AC011298.2-201ENST00000617989 482 ntBASIC20.81■□□□□ 0.92
CASP4P49662 AC130371.2-201ENST00000619443 611 ntBASIC20.81■□□□□ 0.92
CASP4P49662 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.81■□□□□ 0.92
CASP4P49662 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.81■□□□□ 0.92
CASP4P49662 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASP4P49662 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.81■□□□□ 0.92
CASP4P49662 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CASP4P49662 CROCCP3-202ENST00000420820 1947 ntBASIC20.8■□□□□ 0.92
CASP4P49662 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CASP4P49662 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.8■□□□□ 0.92
CASP4P49662 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.8■□□□□ 0.92
CASP4P49662 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CASP4P49662 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.8■□□□□ 0.92
CASP4P49662 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 MIR6786-201ENST00000616843 113 ntBASIC20.8■□□□□ 0.92
CASP4P49662 AP006294.2-201ENST00000641667 209 ntBASIC20.8■□□□□ 0.92
CASP4P49662 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 AC120498.9-201ENST00000339021 3867 ntBASIC20.8■□□□□ 0.92
CASP4P49662 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CASP4P49662 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASP4P49662 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP4P49662 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP4P49662 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP4P49662 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP4P49662 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.79■□□□□ 0.92
CASP4P49662 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASP4P49662 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.79■□□□□ 0.92
CASP4P49662 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP4P49662 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CASP4P49662 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.78■□□□□ 0.92
CASP4P49662 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CASP4P49662 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 SNORA78-201ENST00000459373 127 ntBASIC20.78■□□□□ 0.92
CASP4P49662 AC093827.2-201ENST00000512654 315 ntBASIC20.78■□□□□ 0.92
CASP4P49662 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.78■□□□□ 0.92
CASP4P49662 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP4P49662 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.78■□□□□ 0.92
CASP4P49662 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.78■□□□□ 0.92
CASP4P49662 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.78■□□□□ 0.92
CASP4P49662 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CASP4P49662 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CASP4P49662 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP4P49662 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP4P49662 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP4P49662 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms