Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP9P49458 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP9P49458 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.91■□□□□ 0.3
SRP9P49458 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP9P49458 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP9P49458 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 ESRRAP1-201ENST00000400596 1257 ntBASIC16.9■□□□□ 0.3
SRP9P49458 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 KRT17P3-201ENST00000420566 1262 ntBASIC16.9■□□□□ 0.3
SRP9P49458 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.9■□□□□ 0.3
SRP9P49458 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 AC006333.2-201ENST00000607957 2099 ntBASIC16.9■□□□□ 0.3
SRP9P49458 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SRP9P49458 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SRP9P49458 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP9P49458 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SRP9P49458 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SRP9P49458 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SRP9P49458 AL161938.1-201ENST00000569833 2180 ntBASIC16.89■□□□□ 0.3
SRP9P49458 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SRP9P49458 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SRP9P49458 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.89■□□□□ 0.29
SRP9P49458 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 FAM201B-201ENST00000458407 597 ntBASIC16.89■□□□□ 0.29
SRP9P49458 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.89■□□□□ 0.29
SRP9P49458 AC120498.8-201ENST00000614275 531 ntBASIC16.89■□□□□ 0.29
SRP9P49458 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP9P49458 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SRP9P49458 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
SRP9P49458 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP9P49458 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.88■□□□□ 0.29
SRP9P49458 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.88■□□□□ 0.29
SRP9P49458 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.88■□□□□ 0.29
SRP9P49458 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRP9P49458 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms