Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.69■□□□□ 0.1
SNCAP37840 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.69■□□□□ 0.1
SNCAP37840 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.69■□□□□ 0.1
SNCAP37840 AC007322.1-201ENST00000426983 750 ntBASIC15.69■□□□□ 0.1
SNCAP37840 KRT18P5-201ENST00000436075 1291 ntBASIC15.69■□□□□ 0.1
SNCAP37840 CNN2P6-201ENST00000439038 900 ntBASIC15.69■□□□□ 0.1
SNCAP37840 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.69■□□□□ 0.1
SNCAP37840 BID-214ENST00000617586 542 ntTSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNCAP37840 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.69■□□□□ 0.1
SNCAP37840 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.69■□□□□ 0.1
SNCAP37840 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNCAP37840 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.69■□□□□ 0.1
SNCAP37840 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
SNCAP37840 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 PRORSD1P-202ENST00000563365 2154 ntBASIC15.68■□□□□ 0.1
SNCAP37840 AC006333.2-201ENST00000607957 2099 ntBASIC15.68■□□□□ 0.1
SNCAP37840 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 CYP2T1P-201ENST00000432607 1285 ntBASIC15.68■□□□□ 0.1
SNCAP37840 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.68■□□□□ 0.1
SNCAP37840 AC023632.3-201ENST00000521633 145 ntBASIC15.68■□□□□ 0.1
SNCAP37840 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.68■□□□□ 0.1
SNCAP37840 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.68■□□□□ 0.1
SNCAP37840 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.68■□□□□ 0.1
SNCAP37840 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 OR10C1-204ENST00000622521 1039 ntBASIC15.68■□□□□ 0.1
SNCAP37840 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.68■□□□□ 0.1
SNCAP37840 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SNCAP37840 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SNCAP37840 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNCAP37840 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNCAP37840 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNCAP37840 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.67■□□□□ 0.1
SNCAP37840 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.67■□□□□ 0.1
SNCAP37840 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.67■□□□□ 0.1
SNCAP37840 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.67■□□□□ 0.1
SNCAP37840 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.67■□□□□ 0.1
SNCAP37840 C2orf69P4-201ENST00000565394 541 ntBASIC15.67■□□□□ 0.1
SNCAP37840 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.67■□□□□ 0.1
SNCAP37840 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SNCAP37840 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SNCAP37840 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.67■□□□□ 0.1
SNCAP37840 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.67■□□□□ 0.1
SNCAP37840 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNCAP37840 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms