Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATP6V0CP27449 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
ATP6V0CP27449 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ATP6V0CP27449 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATP6V0CP27449 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP6V0CP27449 AC073592.3-201ENST00000625118 1834 ntBASIC15.27■□□□□ 0.03
ATP6V0CP27449 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 LINC00896-202ENST00000609602 2128 ntBASIC15.26■□□□□ 0.03
ATP6V0CP27449 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 MIR6084-201ENST00000622012 110 ntBASIC15.26■□□□□ 0.03
ATP6V0CP27449 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP6V0CP27449 AC018553.1-201ENST00000616682 1458 ntBASIC15.26■□□□□ 0.03
ATP6V0CP27449 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
ATP6V0CP27449 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.25■□□□□ 0.03
ATP6V0CP27449 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 AC126763.1-201ENST00000552015 2118 ntBASIC15.25■□□□□ 0.03
ATP6V0CP27449 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP6V0CP27449 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP6V0CP27449 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ATP6V0CP27449 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATP6V0CP27449 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.24■□□□□ 0.03
ATP6V0CP27449 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ATP6V0CP27449 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 SDHAP1-207ENST00000440850 2000 ntBASIC15.24■□□□□ 0.03
ATP6V0CP27449 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.24■□□□□ 0.03
ATP6V0CP27449 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
ATP6V0CP27449 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATP6V0CP27449 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms