Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBV6-7A0A0A0MS04 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 HLA-B-256ENST00000639848 1089 ntBASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBV6-7A0A0A0MS04 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 FP475955.4-201ENST00000623131 1990 ntBASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 AIRN-201ENST00000601203 4374 ntBASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV6-7A0A0A0MS04 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC092368.3-202ENST00000574180 1591 ntBASIC15.96■□□□□ 0.14
TRBV6-7A0A0A0MS04 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV6-7A0A0A0MS04 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC006970.2-201ENST00000450065 779 ntBASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 KRT18P16-201ENST00000510337 1294 ntBASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 IRX1P1-201ENST00000438849 1838 ntBASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV6-7A0A0A0MS04 PRORSD1P-202ENST00000563365 2154 ntBASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms