Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 AC023632.3-201ENST00000521633 145 ntBASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRBV25-1A0A075B6N4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 RARRES2P6-201ENST00000567333 442 ntBASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRBV25-1A0A075B6N4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 AC010980.2-201ENST00000587099 1412 ntBASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 AL355472.2-201ENST00000422958 438 ntBASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 C2orf69P4-201ENST00000565394 541 ntBASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 MIR5787-201ENST00000611784 55 ntBASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRBV25-1A0A075B6N4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms