Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 AP000766.1-201ENST00000561746 4140 ntBASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
KRTAP4-4Q9BYR3 AC092435.3-201ENST00000565538 3654 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 GLDCP1-201ENST00000510885 2678 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AL591543.1-202ENST00000642095 4149 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AC245505.2-201ENST00000553572 3055 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 AL590240.1-201ENST00000334118 313 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORA27.1-201ENST00000362604 124 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.48□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP161-201ENST00000363871 115 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms