RNA–Protein interactions for RNA: ENST00000284425.6

ABCA6-201, Transcript of ATP binding cassette subfamily A member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA6, Length 5,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6-201ENST00000284425 NISCHQ9Y2I1 1504 aa14.77□□□□□ -0.04
ABCA6-201ENST00000284425 MYT1Q01538 1121 aa13.55□□□□□ -0.24
ABCA6-201ENST00000284425 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
ABCA6-201ENST00000284425 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
ABCA6-201ENST00000284425 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
ABCA6-201ENST00000284425 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
ABCA6-201ENST00000284425 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
ABCA6-201ENST00000284425 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
ABCA6-201ENST00000284425 CCDC180Q9P1Z9 1646 aa12.41□□□□□ -0.42
ABCA6-201ENST00000284425 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
ABCA6-201ENST00000284425 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
ABCA6-201ENST00000284425 CCER1Q8TC90 406 aaPredicted RBP12.26□□□□□ -0.45
ABCA6-201ENST00000284425 ABCC9O60706 1549 aa12.24□□□□□ -0.45
ABCA6-201ENST00000284425 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
ABCA6-201ENST00000284425 CHIC1Q5VXU3 224 aa12.17□□□□□ -0.46
ABCA6-201ENST00000284425 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
ABCA6-201ENST00000284425 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
ABCA6-201ENST00000284425 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
ABCA6-201ENST00000284425 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
ABCA6-201ENST00000284425 SCRIBQ14160 1630 aa12.05□□□□□ -0.48
ABCA6-201ENST00000284425 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
ABCA6-201ENST00000284425 LOC105371045A0A1W2PR82 267 aa12.01□□□□□ -0.49
ABCA6-201ENST00000284425 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
ABCA6-201ENST00000284425 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
ABCA6-201ENST00000284425 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
ABCA6-201ENST00000284425 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
ABCA6-201ENST00000284425 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
ABCA6-201ENST00000284425 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.52
ABCA6-201ENST00000284425 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
ABCA6-201ENST00000284425 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
ABCA6-201ENST00000284425 NACADO15069 1562 aa11.72□□□□□ -0.53
ABCA6-201ENST00000284425 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
ABCA6-201ENST00000284425 HRCP23327 699 aa11.7□□□□□ -0.54
ABCA6-201ENST00000284425 APLP2Q06481 763 aa11.69□□□□□ -0.54
ABCA6-201ENST00000284425 RB1CC1Q8TDY2 1594 aa11.69□□□□□ -0.54
ABCA6-201ENST00000284425 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
ABCA6-201ENST00000284425 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
ABCA6-201ENST00000284425 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
ABCA6-201ENST00000284425 ZEB1P37275 1124 aaPredicted RBP11.56□□□□□ -0.56
ABCA6-201ENST00000284425 NEFLP07196 543 aa11.56□□□□□ -0.56
ABCA6-201ENST00000284425 MROH2BQ7Z745 1585 aa11.51□□□□□ -0.57
ABCA6-201ENST00000284425 ATP1B4Q9UN42 357 aaPredicted RBP11.45□□□□□ -0.58
ABCA6-201ENST00000284425 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
ABCA6-201ENST00000284425 DAXXQ9UER7 740 aaPredicted RBP11.44□□□□□ -0.58
ABCA6-201ENST00000284425 WIZO95785 1651 aa11.43□□□□□ -0.58
ABCA6-201ENST00000284425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
ABCA6-201ENST00000284425 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
ABCA6-201ENST00000284425 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
ABCA6-201ENST00000284425 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
ABCA6-201ENST00000284425 CCDC88BA6NC98 1476 aa11.3□□□□□ -0.6
ABCA6-201ENST00000284425 BAZ1BQ9UIG0 1483 aaKnown RBP11.29□□□□□ -0.6
ABCA6-201ENST00000284425 ITGAEP38570 1179 aa11.29□□□□□ -0.6
ABCA6-201ENST00000284425 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
ABCA6-201ENST00000284425 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
ABCA6-201ENST00000284425 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
ABCA6-201ENST00000284425 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
ABCA6-201ENST00000284425 SOGA1O94964 1423 aa11.21□□□□□ -0.62
ABCA6-201ENST00000284425 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
ABCA6-201ENST00000284425 BCL11AQ9H165 835 aa11.16□□□□□ -0.62
ABCA6-201ENST00000284425 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
ABCA6-201ENST00000284425 MYT1LQ9UL68 1186 aa11.15□□□□□ -0.62
ABCA6-201ENST00000284425 CLSPNQ9HAW4 1339 aa11.15□□□□□ -0.63
ABCA6-201ENST00000284425 EEA1Q15075 1411 aa11.14□□□□□ -0.63
ABCA6-201ENST00000284425 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
ABCA6-201ENST00000284425 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
ABCA6-201ENST00000284425 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
ABCA6-201ENST00000284425 CLIP1P30622 1438 aa11.11□□□□□ -0.63
ABCA6-201ENST00000284425 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
ABCA6-201ENST00000284425 FAM50AQ14320 339 aaKnown RBP11.1□□□□□ -0.63
ABCA6-201ENST00000284425 ATAD2BQ9ULI0 1458 aa11.09□□□□□ -0.63
ABCA6-201ENST00000284425 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
ABCA6-201ENST00000284425 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
ABCA6-201ENST00000284425 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
ABCA6-201ENST00000284425 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
ABCA6-201ENST00000284425 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
ABCA6-201ENST00000284425 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
ABCA6-201ENST00000284425 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
ABCA6-201ENST00000284425 BICRAQ9NZM4 1560 aa10.98□□□□□ -0.65
ABCA6-201ENST00000284425 ZNF326Q5BKZ1 582 aaKnown RBP10.98□□□□□ -0.65
ABCA6-201ENST00000284425 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
ABCA6-201ENST00000284425 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
ABCA6-201ENST00000284425 NEUROD1Q13562 356 aa10.96□□□□□ -0.66
ABCA6-201ENST00000284425 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
ABCA6-201ENST00000284425 PRKCSHP14314 528 aaPredicted RBP10.94□□□□□ -0.66
ABCA6-201ENST00000284425 FBLN2P98095 1184 aa10.93□□□□□ -0.66
ABCA6-201ENST00000284425 CUX2O14529 1486 aa10.92□□□□□ -0.66
ABCA6-201ENST00000284425 RAPGEF2Q9Y4G8 1499 aa10.91□□□□□ -0.66
ABCA6-201ENST00000284425 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
ABCA6-201ENST00000284425 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
ABCA6-201ENST00000284425 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
ABCA6-201ENST00000284425 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
ABCA6-201ENST00000284425 TRIM52Q96A61 297 aa10.87□□□□□ -0.67
ABCA6-201ENST00000284425 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
ABCA6-201ENST00000284425 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
ABCA6-201ENST00000284425 NCAPD3P42695 1498 aa10.83□□□□□ -0.68
ABCA6-201ENST00000284425 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.68
ABCA6-201ENST00000284425 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
ABCA6-201ENST00000284425 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
ABCA6-201ENST00000284425 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
ABCA6-201ENST00000284425 ANP32EQ9BTT0 268 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms