RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
C9orf72-206ENST00000619707 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
C9orf72-206ENST00000619707 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
C9orf72-206ENST00000619707 HRCP23327 699 aa14.56□□□□□ -0.08
C9orf72-206ENST00000619707 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
C9orf72-206ENST00000619707 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
C9orf72-206ENST00000619707 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.12
C9orf72-206ENST00000619707 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.12
C9orf72-206ENST00000619707 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
C9orf72-206ENST00000619707 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
C9orf72-206ENST00000619707 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
C9orf72-206ENST00000619707 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
C9orf72-206ENST00000619707 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
C9orf72-206ENST00000619707 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
C9orf72-206ENST00000619707 PELP1Q8IZL8 1130 aaKnown RBP13.88□□□□□ -0.19
C9orf72-206ENST00000619707 ZEB1P37275 1124 aaPredicted RBP13.83□□□□□ -0.2
C9orf72-206ENST00000619707 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
C9orf72-206ENST00000619707 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
C9orf72-206ENST00000619707 ABCC9O60706 1549 aa13.6□□□□□ -0.23
C9orf72-206ENST00000619707 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
C9orf72-206ENST00000619707 MYT1Q01538 1121 aa13.55□□□□□ -0.24
C9orf72-206ENST00000619707 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
C9orf72-206ENST00000619707 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
C9orf72-206ENST00000619707 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
C9orf72-206ENST00000619707 PRKCSHP14314 528 aaPredicted RBP13.42□□□□□ -0.26
C9orf72-206ENST00000619707 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
C9orf72-206ENST00000619707 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
C9orf72-206ENST00000619707 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
C9orf72-206ENST00000619707 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
C9orf72-206ENST00000619707 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
C9orf72-206ENST00000619707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
C9orf72-206ENST00000619707 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
C9orf72-206ENST00000619707 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
C9orf72-206ENST00000619707 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
C9orf72-206ENST00000619707 CECR2Q9BXF3 1484 aa13.14□□□□□ -0.31
C9orf72-206ENST00000619707 MROH2BQ7Z745 1585 aa13.14□□□□□ -0.31
C9orf72-206ENST00000619707 TTBK1Q5TCY1 1321 aaPredicted RBP13.11□□□□□ -0.31
C9orf72-206ENST00000619707 WIZO95785 1651 aa13.09□□□□□ -0.31
C9orf72-206ENST00000619707 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
C9orf72-206ENST00000619707 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
C9orf72-206ENST00000619707 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
C9orf72-206ENST00000619707 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
C9orf72-206ENST00000619707 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
C9orf72-206ENST00000619707 YTHDC1Q96MU7 727 aaKnown RBP13.02□□□□□ -0.33
C9orf72-206ENST00000619707 NACADO15069 1562 aa13.01□□□□□ -0.33
C9orf72-206ENST00000619707 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
C9orf72-206ENST00000619707 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
C9orf72-206ENST00000619707 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
C9orf72-206ENST00000619707 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
C9orf72-206ENST00000619707 MIER1Q8N108 512 aa12.92□□□□□ -0.34
C9orf72-206ENST00000619707 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
C9orf72-206ENST00000619707 SOGA1O94964 1423 aa12.9□□□□□ -0.34
C9orf72-206ENST00000619707 EEA1Q15075 1411 aa12.9□□□□□ -0.34
C9orf72-206ENST00000619707 APLP2Q06481 763 aa12.9□□□□□ -0.35
C9orf72-206ENST00000619707 TOP2AP11388 1531 aaKnown RBP12.88□□□□□ -0.35
C9orf72-206ENST00000619707 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
C9orf72-206ENST00000619707 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
C9orf72-206ENST00000619707 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
C9orf72-206ENST00000619707 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
C9orf72-206ENST00000619707 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
C9orf72-206ENST00000619707 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
C9orf72-206ENST00000619707 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
C9orf72-206ENST00000619707 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
C9orf72-206ENST00000619707 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
C9orf72-206ENST00000619707 CLIP1P30622 1438 aa12.72□□□□□ -0.37
C9orf72-206ENST00000619707 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
C9orf72-206ENST00000619707 KIF21BO75037 1637 aa12.69□□□□□ -0.38
C9orf72-206ENST00000619707 SUPT16HQ9Y5B9 1047 aaKnown RBP12.68□□□□□ -0.38
C9orf72-206ENST00000619707 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
C9orf72-206ENST00000619707 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
C9orf72-206ENST00000619707 DHX57Q6P158 1386 aaKnown RBP12.6□□□□□ -0.39
C9orf72-206ENST00000619707 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
C9orf72-206ENST00000619707 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
C9orf72-206ENST00000619707 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
C9orf72-206ENST00000619707 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
C9orf72-206ENST00000619707 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
C9orf72-206ENST00000619707 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
C9orf72-206ENST00000619707 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
C9orf72-206ENST00000619707 EIF5BO60841 1220 aaKnown RBP12.45□□□□□ -0.42
C9orf72-206ENST00000619707 RRBP1Q9P2E9 1410 aaKnown RBP12.44□□□□□ -0.42
C9orf72-206ENST00000619707 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
C9orf72-206ENST00000619707 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
C9orf72-206ENST00000619707 BCANQ96GW7 911 aa12.42□□□□□ -0.42
C9orf72-206ENST00000619707 CUX2O14529 1486 aa12.42□□□□□ -0.42
C9orf72-206ENST00000619707 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
C9orf72-206ENST00000619707 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
C9orf72-206ENST00000619707 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
C9orf72-206ENST00000619707 FKBP8Q14318 412 aa12.4□□□□□ -0.42
C9orf72-206ENST00000619707 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
C9orf72-206ENST00000619707 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.43
C9orf72-206ENST00000619707 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
C9orf72-206ENST00000619707 ITGAEP38570 1179 aa12.37□□□□□ -0.43
C9orf72-206ENST00000619707 NEFLP07196 543 aa12.37□□□□□ -0.43
C9orf72-206ENST00000619707 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
C9orf72-206ENST00000619707 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
C9orf72-206ENST00000619707 BICRAQ9NZM4 1560 aa12.35□□□□□ -0.43
C9orf72-206ENST00000619707 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
C9orf72-206ENST00000619707 RAB3GAP2Q9H2M9 1393 aa12.33□□□□□ -0.43
C9orf72-206ENST00000619707 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
C9orf72-206ENST00000619707 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms