RNA–Protein interactions for RNA: ENST00000513826.1

FBXO38-218, Transcript of F-box protein 38, humanhuman

TSL 1 (best) BASIC

Gene FBXO38, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-218ENST00000513826 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
FBXO38-218ENST00000513826 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
FBXO38-218ENST00000513826 NISCHQ9Y2I1 1504 aa10.47□□□□□ -0.73
FBXO38-218ENST00000513826 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
FBXO38-218ENST00000513826 MYT1Q01538 1121 aa10.22□□□□□ -0.77
FBXO38-218ENST00000513826 TTBK1Q5TCY1 1321 aaPredicted RBP9.99□□□□□ -0.81
FBXO38-218ENST00000513826 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
FBXO38-218ENST00000513826 HRCP23327 699 aa9.77□□□□□ -0.85
FBXO38-218ENST00000513826 APLP2Q06481 763 aa9.55□□□□□ -0.88
FBXO38-218ENST00000513826 SENP3Q9H4L4 574 aaPredicted RBP9.55□□□□□ -0.88
FBXO38-218ENST00000513826 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
FBXO38-218ENST00000513826 SCAF1Q9H7N4 1312 aaKnown RBP9.5□□□□□ -0.89
FBXO38-218ENST00000513826 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
FBXO38-218ENST00000513826 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
FBXO38-218ENST00000513826 BCL11AQ9H165 835 aa9.24□□□□□ -0.93
FBXO38-218ENST00000513826 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
FBXO38-218ENST00000513826 DCAF1Q9Y4B6 1507 aa9.2□□□□□ -0.94
FBXO38-218ENST00000513826 FAM9AQ8IZU1 332 aaPredicted RBP9.19□□□□□ -0.94
FBXO38-218ENST00000513826 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
FBXO38-218ENST00000513826 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
FBXO38-218ENST00000513826 ACIN1Q9UKV3 1341 aaKnown RBP9.07□□□□□ -0.96
FBXO38-218ENST00000513826 FOXD1Q16676 465 aa9.03□□□□□ -0.96
FBXO38-218ENST00000513826 PLPPR3Q6T4P5 718 aa8.97□□□□□ -0.97
FBXO38-218ENST00000513826 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
FBXO38-218ENST00000513826 ZEB1P37275 1124 aaPredicted RBP8.94□□□□□ -0.98
FBXO38-218ENST00000513826 DAXXQ9UER7 740 aaPredicted RBP8.93□□□□□ -0.98
FBXO38-218ENST00000513826 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
FBXO38-218ENST00000513826 ANP32EQ9BTT0 268 aa8.91□□□□□ -0.98
FBXO38-218ENST00000513826 ZCCHC6Q5VYS8 1495 aaKnown RBP8.85□□□□□ -0.99
FBXO38-218ENST00000513826 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
FBXO38-218ENST00000513826 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
FBXO38-218ENST00000513826 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
FBXO38-218ENST00000513826 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
FBXO38-218ENST00000513826 NACADO15069 1562 aa8.74□□□□□ -1.01
FBXO38-218ENST00000513826 ADRA2BP18089 450 aa8.73□□□□□ -1.01
FBXO38-218ENST00000513826 CSRNP3Q8WYN3 585 aa8.72□□□□□ -1.01
FBXO38-218ENST00000513826 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.02
FBXO38-218ENST00000513826 CLSPNQ9HAW4 1339 aa8.69□□□□□ -1.02
FBXO38-218ENST00000513826 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
FBXO38-218ENST00000513826 TSHZ2Q9NRE2 1034 aa8.6□□□□□ -1.03
FBXO38-218ENST00000513826 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
FBXO38-218ENST00000513826 TRIM41Q8WV44 630 aa8.58□□□□□ -1.04
FBXO38-218ENST00000513826 ERICH6BQ5W0A0 696 aa8.56□□□□□ -1.04
FBXO38-218ENST00000513826 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
FBXO38-218ENST00000513826 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
FBXO38-218ENST00000513826 MYT1LQ9UL68 1186 aa8.46□□□□□ -1.05
FBXO38-218ENST00000513826 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
FBXO38-218ENST00000513826 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
FBXO38-218ENST00000513826 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
FBXO38-218ENST00000513826 MSH5O43196 834 aa8.37□□□□□ -1.07
FBXO38-218ENST00000513826 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
FBXO38-218ENST00000513826 UNC13AQ9UPW8 1703 aa8.35□□□□□ -1.07
FBXO38-218ENST00000513826 SALL2Q9Y467 1007 aaPredicted RBP8.34□□□□□ -1.07
FBXO38-218ENST00000513826 PLEKHG5O94827 1062 aa8.32□□□□□ -1.08
FBXO38-218ENST00000513826 PKNOX2Q96KN3 472 aa8.32□□□□□ -1.08
FBXO38-218ENST00000513826 ABCC9O60706 1549 aa8.29□□□□□ -1.08
FBXO38-218ENST00000513826 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
FBXO38-218ENST00000513826 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
FBXO38-218ENST00000513826 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
FBXO38-218ENST00000513826 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
FBXO38-218ENST00000513826 ZNF316A6NFI3 1004 aaPredicted RBP8.21□□□□□ -1.09
FBXO38-218ENST00000513826 BICRAQ9NZM4 1560 aa8.21□□□□□ -1.1
FBXO38-218ENST00000513826 DEKP35659 375 aaKnown RBP8.19□□□□□ -1.1
FBXO38-218ENST00000513826 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
FBXO38-218ENST00000513826 MIER1Q8N108 512 aa8.17□□□□□ -1.1
FBXO38-218ENST00000513826 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
FBXO38-218ENST00000513826 NCBP3Q53F19 620 aaKnown RBP8.15□□□□□ -1.1
FBXO38-218ENST00000513826 SCRIBQ14160 1630 aa8.15□□□□□ -1.1
FBXO38-218ENST00000513826 SMARCA2P51531 1590 aa8.15□□□□□ -1.11
FBXO38-218ENST00000513826 WASHC2CQ9Y4E1 1318 aa8.15□□□□□ -1.11
FBXO38-218ENST00000513826 WASHC2AQ641Q2 1341 aa8.14□□□□□ -1.11
FBXO38-218ENST00000513826 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
FBXO38-218ENST00000513826 ARXQ96QS3 562 aa8.12□□□□□ -1.11
FBXO38-218ENST00000513826 FGD1P98174 961 aa8.1□□□□□ -1.11
FBXO38-218ENST00000513826 SMARCA4P51532 1647 aa8.08□□□□□ -1.12
FBXO38-218ENST00000513826 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
FBXO38-218ENST00000513826 HMGXB3Q12766 1538 aa8.06□□□□□ -1.12
FBXO38-218ENST00000513826 AAMPQ13685 434 aa8.06□□□□□ -1.12
FBXO38-218ENST00000513826 NCAPD3P42695 1498 aa8.06□□□□□ -1.12
FBXO38-218ENST00000513826 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
FBXO38-218ENST00000513826 NEFLP07196 543 aa8.04□□□□□ -1.12
FBXO38-218ENST00000513826 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
FBXO38-218ENST00000513826 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
FBXO38-218ENST00000513826 DCAF8L2P0C7V8 631 aa8.01□□□□□ -1.13
FBXO38-218ENST00000513826 TOP2AP11388 1531 aaKnown RBP8□□□□□ -1.13
FBXO38-218ENST00000513826 PDIA4P13667 645 aaKnown RBP7.99□□□□□ -1.13
FBXO38-218ENST00000513826 PRDM2Q13029 1718 aa7.98□□□□□ -1.13
FBXO38-218ENST00000513826 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
FBXO38-218ENST00000513826 CENPJQ9HC77 1338 aaPredicted RBP7.97□□□□□ -1.13
FBXO38-218ENST00000513826 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
FBXO38-218ENST00000513826 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
FBXO38-218ENST00000513826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.95□□□□□ -1.14
FBXO38-218ENST00000513826 RSF1Q96T23 1441 aaPredicted RBP7.95□□□□□ -1.14
FBXO38-218ENST00000513826 PDE4CQ08493 712 aa7.95□□□□□ -1.14
FBXO38-218ENST00000513826 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
FBXO38-218ENST00000513826 RSPH4AQ5TD94 716 aa7.94□□□□□ -1.14
FBXO38-218ENST00000513826 SUPT5HO00267 1087 aaKnown RBP7.93□□□□□ -1.14
FBXO38-218ENST00000513826 KCNA4P22459 653 aa7.91□□□□□ -1.14
FBXO38-218ENST00000513826 USP35Q9P2H5 1018 aa7.91□□□□□ -1.14
FBXO38-218ENST00000513826 CUX2O14529 1486 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms