RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
CDKAL1-201ENST00000274695 AEBP2Q6ZN18 517 aaPredicted RBP14.88□□□□□ -0.03
CDKAL1-201ENST00000274695 PHF23Q9BUL5 403 aaPredicted RBP13.86□□□□□ -0.19
CDKAL1-201ENST00000274695 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
CDKAL1-201ENST00000274695 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
CDKAL1-201ENST00000274695 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
CDKAL1-201ENST00000274695 KCNA4P22459 653 aa12.75□□□□□ -0.37
CDKAL1-201ENST00000274695 NISCHQ9Y2I1 1504 aa12.61□□□□□ -0.39
CDKAL1-201ENST00000274695 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
CDKAL1-201ENST00000274695 ADRA2BP18089 450 aa12.38□□□□□ -0.43
CDKAL1-201ENST00000274695 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
CDKAL1-201ENST00000274695 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
CDKAL1-201ENST00000274695 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
CDKAL1-201ENST00000274695 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.48
CDKAL1-201ENST00000274695 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
CDKAL1-201ENST00000274695 ZBTB22O15209 634 aa11.87□□□□□ -0.51
CDKAL1-201ENST00000274695 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
CDKAL1-201ENST00000274695 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
CDKAL1-201ENST00000274695 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
CDKAL1-201ENST00000274695 PRKCSHP14314 528 aaPredicted RBP11.5□□□□□ -0.57
CDKAL1-201ENST00000274695 FOXD1Q16676 465 aa11.33□□□□□ -0.6
CDKAL1-201ENST00000274695 FKBP8Q14318 412 aa11.24□□□□□ -0.61
CDKAL1-201ENST00000274695 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
CDKAL1-201ENST00000274695 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
CDKAL1-201ENST00000274695 PLCB2Q00722 1185 aa11.15□□□□□ -0.63
CDKAL1-201ENST00000274695 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
CDKAL1-201ENST00000274695 BCANQ96GW7 911 aa11.04□□□□□ -0.64
CDKAL1-201ENST00000274695 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
CDKAL1-201ENST00000274695 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
CDKAL1-201ENST00000274695 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
CDKAL1-201ENST00000274695 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
CDKAL1-201ENST00000274695 CNKSR2Q8WXI2 1034 aa10.91□□□□□ -0.66
CDKAL1-201ENST00000274695 PIAS4Q8N2W9 510 aaPredicted RBP10.88□□□□□ -0.67
CDKAL1-201ENST00000274695 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
CDKAL1-201ENST00000274695 ZCCHC6Q5VYS8 1495 aaKnown RBP10.82□□□□□ -0.68
CDKAL1-201ENST00000274695 KDM2AQ9Y2K7 1162 aa10.77□□□□□ -0.69
CDKAL1-201ENST00000274695 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
CDKAL1-201ENST00000274695 ARXQ96QS3 562 aa10.76□□□□□ -0.69
CDKAL1-201ENST00000274695 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
CDKAL1-201ENST00000274695 DCAF1Q9Y4B6 1507 aa10.73□□□□□ -0.69
CDKAL1-201ENST00000274695 FBLN2P98095 1184 aa10.71□□□□□ -0.7
CDKAL1-201ENST00000274695 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
CDKAL1-201ENST00000274695 DCAF8L2P0C7V8 631 aa10.62□□□□□ -0.71
CDKAL1-201ENST00000274695 GTF3C3Q9Y5Q9 886 aa10.6□□□□□ -0.71
CDKAL1-201ENST00000274695 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
CDKAL1-201ENST00000274695 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
CDKAL1-201ENST00000274695 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
CDKAL1-201ENST00000274695 PKD2Q13563 968 aa10.46□□□□□ -0.73
CDKAL1-201ENST00000274695 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.74
CDKAL1-201ENST00000274695 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
CDKAL1-201ENST00000274695 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CDKAL1-201ENST00000274695 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
CDKAL1-201ENST00000274695 MYO15BQ96JP2 1530 aa10.42□□□□□ -0.74
CDKAL1-201ENST00000274695 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDKAL1-201ENST00000274695 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
CDKAL1-201ENST00000274695 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
CDKAL1-201ENST00000274695 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
CDKAL1-201ENST00000274695 CFAP44Q96MT7 982 aa10.36□□□□□ -0.75
CDKAL1-201ENST00000274695 TSHZ2Q9NRE2 1034 aa10.35□□□□□ -0.75
CDKAL1-201ENST00000274695 ABCC9O60706 1549 aa10.31□□□□□ -0.76
CDKAL1-201ENST00000274695 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
CDKAL1-201ENST00000274695 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
CDKAL1-201ENST00000274695 FBXO3Q9UK99 471 aa10.26□□□□□ -0.77
CDKAL1-201ENST00000274695 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
CDKAL1-201ENST00000274695 C14orf37Q86TY3 774 aa10.25□□□□□ -0.77
CDKAL1-201ENST00000274695 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
CDKAL1-201ENST00000274695 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
CDKAL1-201ENST00000274695 NBR1Q14596 966 aa10.17□□□□□ -0.78
CDKAL1-201ENST00000274695 HRCP23327 699 aa10.14□□□□□ -0.79
CDKAL1-201ENST00000274695 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
CDKAL1-201ENST00000274695 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
CDKAL1-201ENST00000274695 DNAJC5Q9H3Z4 198 aa10.12□□□□□ -0.79
CDKAL1-201ENST00000274695 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
CDKAL1-201ENST00000274695 PROM2Q8N271 834 aa10.1□□□□□ -0.79
CDKAL1-201ENST00000274695 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
CDKAL1-201ENST00000274695 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
CDKAL1-201ENST00000274695 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
CDKAL1-201ENST00000274695 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
CDKAL1-201ENST00000274695 RGL2O15211 777 aa10.06□□□□□ -0.8
CDKAL1-201ENST00000274695 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
CDKAL1-201ENST00000274695 RB1CC1Q8TDY2 1594 aa10.03□□□□□ -0.8
CDKAL1-201ENST00000274695 SHROOM4Q9ULL8 1493 aa10.01□□□□□ -0.81
CDKAL1-201ENST00000274695 UBTFP17480 764 aaKnown RBP10□□□□□ -0.81
CDKAL1-201ENST00000274695 TRIM26Q12899 539 aaPredicted RBP9.99□□□□□ -0.81
CDKAL1-201ENST00000274695 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
CDKAL1-201ENST00000274695 NACADO15069 1562 aa9.92□□□□□ -0.82
CDKAL1-201ENST00000274695 DMRT2Q9Y5R5 561 aa9.91□□□□□ -0.82
CDKAL1-201ENST00000274695 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.82
CDKAL1-201ENST00000274695 NPM2Q86SE8 214 aaKnown RBP9.9□□□□□ -0.82
CDKAL1-201ENST00000274695 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.83
CDKAL1-201ENST00000274695 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
CDKAL1-201ENST00000274695 BAZ1AQ9NRL2 1556 aaPredicted RBP9.87□□□□□ -0.83
CDKAL1-201ENST00000274695 ZNF219Q9P2Y4 722 aaPredicted RBP9.85□□□□□ -0.83
CDKAL1-201ENST00000274695 SPOCK2Q92563 424 aa9.84□□□□□ -0.83
CDKAL1-201ENST00000274695 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
CDKAL1-201ENST00000274695 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
CDKAL1-201ENST00000274695 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
CDKAL1-201ENST00000274695 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
CDKAL1-201ENST00000274695 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
CDKAL1-201ENST00000274695 MSH5O43196 834 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms