Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC01558Q9Y6Z2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PCDHB17P-201ENST00000539533 2393 ntBASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LBH-205ENST00000407930 756 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 AC099063.4-201ENST00000641099 1602 ntBASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC01558Q9Y6Z2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LINC01558Q9Y6Z2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms