Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PNMA6B-201ENST00000538162 1200 ntBASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HHLA3Q9XRX5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HHLA3Q9XRX5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HHLA3Q9XRX5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.96□□□□□ -0.18
HHLA3Q9XRX5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HHLA3Q9XRX5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 BICD1-207ENST00000551848 1962 ntBASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 AC090164.3-201ENST00000610780 2143 ntBASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HHLA3Q9XRX5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms