Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 AC099778.1-201ENST00000568593 1911 ntBASIC13.29□□□□□ -0.28
UPK3BQ9BT76 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UPK3BQ9BT76 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 MESTP1-201ENST00000404287 994 ntBASIC13.28□□□□□ -0.28
UPK3BQ9BT76 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 FITM1-202ENST00000559294 800 ntBASIC13.28□□□□□ -0.28
UPK3BQ9BT76 AP005242.2-201ENST00000580065 1175 ntBASIC13.28□□□□□ -0.28
UPK3BQ9BT76 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 AC097493.4-201ENST00000641197 219 ntBASIC13.28□□□□□ -0.28
UPK3BQ9BT76 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 LINC01006-201ENST00000333319 2292 ntBASIC13.28□□□□□ -0.28
UPK3BQ9BT76 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK3BQ9BT76 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK3BQ9BT76 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AC211429.1-201ENST00000415277 523 ntBASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AC004951.3-201ENST00000418645 1148 ntBASIC13.27□□□□□ -0.29
UPK3BQ9BT76 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 TSPY15P-201ENST00000457163 923 ntBASIC13.27□□□□□ -0.29
UPK3BQ9BT76 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 AL160286.2-201ENST00000567150 934 ntBASIC13.27□□□□□ -0.29
UPK3BQ9BT76 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.27□□□□□ -0.29
UPK3BQ9BT76 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms