Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.43□□□□□ -0.1
AP1S3Q96PC3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S3Q96PC3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 AC142381.2-201ENST00000566120 298 ntBASIC14.41□□□□□ -0.1
AP1S3Q96PC3 TERF1P2-201ENST00000583350 1212 ntBASIC14.41□□□□□ -0.1
AP1S3Q96PC3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 AC018470.1-201ENST00000624790 3129 ntBASIC14.41□□□□□ -0.1
AP1S3Q96PC3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 KRT16P6-202ENST00000425692 1426 ntBASIC14.41□□□□□ -0.1
AP1S3Q96PC3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S3Q96PC3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 AC093503.3-201ENST00000624917 2352 ntBASIC14.4□□□□□ -0.1
AP1S3Q96PC3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 SUDS3P1-201ENST00000505831 966 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms