Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 AL133373.2-201ENST00000623187 2828 ntBASIC12.93□□□□□ -0.34
COPS9Q8WXC6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COPS9Q8WXC6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SIRPAP1-201ENST00000448467 1770 ntBASIC12.92□□□□□ -0.34
COPS9Q8WXC6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 IGHV3-19-201ENST00000521488 291 ntBASIC12.92□□□□□ -0.34
COPS9Q8WXC6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 AL162741.1-201ENST00000565563 1558 ntBASIC12.92□□□□□ -0.34
COPS9Q8WXC6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
COPS9Q8WXC6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 BX842568.3-201ENST00000418104 571 ntBASIC12.91□□□□□ -0.34
COPS9Q8WXC6 KRT16P3-201ENST00000439127 1283 ntBASIC12.91□□□□□ -0.34
COPS9Q8WXC6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COPS9Q8WXC6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.9□□□□□ -0.34
COPS9Q8WXC6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms