Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.08□□□□□ -0.16
CKS2P33552 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CKS2P33552 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.08□□□□□ -0.16
CKS2P33552 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.08□□□□□ -0.16
CKS2P33552 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CKS2P33552 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CKS2P33552 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS2P33552 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.07□□□□□ -0.16
CKS2P33552 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.07□□□□□ -0.16
CKS2P33552 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CKS2P33552 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.07□□□□□ -0.16
CKS2P33552 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.07□□□□□ -0.16
CKS2P33552 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.07□□□□□ -0.16
CKS2P33552 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.07□□□□□ -0.16
CKS2P33552 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CKS2P33552 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 AL512353.2-201ENST00000448759 1962 ntBASIC14.07□□□□□ -0.16
CKS2P33552 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CKS2P33552 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CKS2P33552 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CKS2P33552 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.07□□□□□ -0.16
CKS2P33552 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.06□□□□□ -0.16
CKS2P33552 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CKS2P33552 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.06□□□□□ -0.16
CKS2P33552 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 IRS3P-201ENST00000223076 1006 ntBASIC14.06□□□□□ -0.16
CKS2P33552 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.06□□□□□ -0.16
CKS2P33552 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.06□□□□□ -0.16
CKS2P33552 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CKS2P33552 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.05□□□□□ -0.16
CKS2P33552 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CKS2P33552 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.05□□□□□ -0.16
CKS2P33552 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms