Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56-RWDD3S4R434 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56-RWDD3S4R434 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM56-RWDD3S4R434 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM56-RWDD3S4R434 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 AC091060.1-201ENST00000623524 1766 ntBASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TMEM56-RWDD3S4R434 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM56-RWDD3S4R434 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM56-RWDD3S4R434 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM56-RWDD3S4R434 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM56-RWDD3S4R434 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM56-RWDD3S4R434 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.72■□□□□ 0.91
TMEM56-RWDD3S4R434 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM56-RWDD3S4R434 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56-RWDD3S4R434 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.71■□□□□ 0.91
TMEM56-RWDD3S4R434 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56-RWDD3S4R434 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM56-RWDD3S4R434 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM56-RWDD3S4R434 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM56-RWDD3S4R434 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM56-RWDD3S4R434 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM56-RWDD3S4R434 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.7■□□□□ 0.9
TMEM56-RWDD3S4R434 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56-RWDD3S4R434 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.69■□□□□ 0.9
TMEM56-RWDD3S4R434 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56-RWDD3S4R434 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TMEM56-RWDD3S4R434 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM56-RWDD3S4R434 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.68■□□□□ 0.9
TMEM56-RWDD3S4R434 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM56-RWDD3S4R434 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TMEM56-RWDD3S4R434 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56-RWDD3S4R434 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56-RWDD3S4R434 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56-RWDD3S4R434 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM56-RWDD3S4R434 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.66■□□□□ 0.9
TMEM56-RWDD3S4R434 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM56-RWDD3S4R434 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM56-RWDD3S4R434 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 AC018358.1-201ENST00000631079 1402 ntBASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM56-RWDD3S4R434 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TMEM56-RWDD3S4R434 AC145676.1-201ENST00000514988 2004 ntBASIC20.64■□□□□ 0.89
TMEM56-RWDD3S4R434 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM56-RWDD3S4R434 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM56-RWDD3S4R434 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 SETD8P1-201ENST00000623146 1180 ntBASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM56-RWDD3S4R434 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56-RWDD3S4R434 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56-RWDD3S4R434 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM56-RWDD3S4R434 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM56-RWDD3S4R434 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM56-RWDD3S4R434 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TMEM56-RWDD3S4R434 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56-RWDD3S4R434 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM56-RWDD3S4R434 RARRES2P7-201ENST00000567349 469 ntBASIC20.6■□□□□ 0.89
TMEM56-RWDD3S4R434 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56-RWDD3S4R434 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM56-RWDD3S4R434 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM56-RWDD3S4R434 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM56-RWDD3S4R434 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM56-RWDD3S4R434 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM56-RWDD3S4R434 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM56-RWDD3S4R434 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TMEM56-RWDD3S4R434 AL391121.1-201ENST00000607967 1349 ntBASIC20.57■□□□□ 0.88
TMEM56-RWDD3S4R434 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM56-RWDD3S4R434 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56-RWDD3S4R434 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56-RWDD3S4R434 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM56-RWDD3S4R434 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM56-RWDD3S4R434 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM56-RWDD3S4R434 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM56-RWDD3S4R434 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM56-RWDD3S4R434 AC020928.2-201ENST00000588717 2197 ntBASIC20.55■□□□□ 0.88
TMEM56-RWDD3S4R434 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms