Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.37■■□□□ 1.81
HS3ST4Q9Y661 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HS3ST4Q9Y661 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.36■■□□□ 1.81
HS3ST4Q9Y661 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.36■■□□□ 1.81
HS3ST4Q9Y661 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HS3ST4Q9Y661 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HS3ST4Q9Y661 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.35■■□□□ 1.81
HS3ST4Q9Y661 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HS3ST4Q9Y661 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HS3ST4Q9Y661 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HS3ST4Q9Y661 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HS3ST4Q9Y661 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HS3ST4Q9Y661 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.33■■□□□ 1.81
HS3ST4Q9Y661 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HS3ST4Q9Y661 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
HS3ST4Q9Y661 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HS3ST4Q9Y661 HLA-V-202ENST00000446817 847 ntBASIC26.32■■□□□ 1.8
HS3ST4Q9Y661 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HS3ST4Q9Y661 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
HS3ST4Q9Y661 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
HS3ST4Q9Y661 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HS3ST4Q9Y661 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HS3ST4Q9Y661 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 MIR639-201ENST00000384974 98 ntBASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HS3ST4Q9Y661 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
HS3ST4Q9Y661 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
HS3ST4Q9Y661 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.29■■□□□ 1.8
HS3ST4Q9Y661 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HS3ST4Q9Y661 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HS3ST4Q9Y661 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HS3ST4Q9Y661 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
HS3ST4Q9Y661 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HS3ST4Q9Y661 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HS3ST4Q9Y661 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
HS3ST4Q9Y661 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
HS3ST4Q9Y661 DRD5P2-201ENST00000421395 2012 ntBASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.26■■□□□ 1.79
HS3ST4Q9Y661 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.25■■□□□ 1.79
HS3ST4Q9Y661 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HS3ST4Q9Y661 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HS3ST4Q9Y661 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.25■■□□□ 1.79
HS3ST4Q9Y661 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HS3ST4Q9Y661 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
HS3ST4Q9Y661 AP002414.2-202ENST00000590929 1450 ntBASIC26.23■■□□□ 1.79
HS3ST4Q9Y661 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HS3ST4Q9Y661 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
HS3ST4Q9Y661 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HS3ST4Q9Y661 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HS3ST4Q9Y661 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
HS3ST4Q9Y661 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
HS3ST4Q9Y661 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
HS3ST4Q9Y661 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HS3ST4Q9Y661 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
HS3ST4Q9Y661 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HS3ST4Q9Y661 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HS3ST4Q9Y661 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HS3ST4Q9Y661 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HS3ST4Q9Y661 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HS3ST4Q9Y661 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
HS3ST4Q9Y661 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HS3ST4Q9Y661 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.19■■□□□ 1.78
HS3ST4Q9Y661 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HS3ST4Q9Y661 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
HS3ST4Q9Y661 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HS3ST4Q9Y661 AC008813.1-201ENST00000536597 885 ntBASIC26.18■■□□□ 1.78
HS3ST4Q9Y661 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HS3ST4Q9Y661 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.17■■□□□ 1.78
HS3ST4Q9Y661 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HS3ST4Q9Y661 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HS3ST4Q9Y661 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HS3ST4Q9Y661 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.16■■□□□ 1.78
HS3ST4Q9Y661 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.16■■□□□ 1.78
HS3ST4Q9Y661 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
HS3ST4Q9Y661 MIR4449-201ENST00000578365 66 ntBASIC26.14■■□□□ 1.78
HS3ST4Q9Y661 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
HS3ST4Q9Y661 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
HS3ST4Q9Y661 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.12■■□□□ 1.77
HS3ST4Q9Y661 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HS3ST4Q9Y661 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
HS3ST4Q9Y661 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HS3ST4Q9Y661 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
HS3ST4Q9Y661 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms