Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MIR5787-201ENST00000611784 55 ntBASIC10.92□□□□□ -0.66
MACF1Q9UPN3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 AC103724.3-201ENST00000564481 992 ntBASIC10.92□□□□□ -0.66
MACF1Q9UPN3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 AC026271.2-201ENST00000428091 497 ntBASIC10.92□□□□□ -0.66
MACF1Q9UPN3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
MACF1Q9UPN3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
MACF1Q9UPN3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 ESRRAP2-201ENST00000418437 1549 ntBASIC10.9□□□□□ -0.66
MACF1Q9UPN3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MACF1Q9UPN3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
MACF1Q9UPN3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 AC135279.3-201ENST00000610945 1311 ntBASIC10.89□□□□□ -0.67
MACF1Q9UPN3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 DUX4L9-201ENST00000449051 1259 ntBASIC10.89□□□□□ -0.67
MACF1Q9UPN3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.89□□□□□ -0.67
MACF1Q9UPN3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC10.89□□□□□ -0.67
MACF1Q9UPN3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MACF1Q9UPN3 AC090192.1-201ENST00000517740 490 ntBASIC10.88□□□□□ -0.67
MACF1Q9UPN3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MACF1Q9UPN3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC10.88□□□□□ -0.67
MACF1Q9UPN3 AC133552.2-201ENST00000619106 1032 ntBASIC10.88□□□□□ -0.67
MACF1Q9UPN3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MACF1Q9UPN3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 AC007029.1-201ENST00000604183 313 ntBASIC10.87□□□□□ -0.67
MACF1Q9UPN3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
MACF1Q9UPN3 YBX1P4-201ENST00000392794 808 ntBASIC10.87□□□□□ -0.67
MACF1Q9UPN3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 AC139795.1-202ENST00000500444 432 ntBASIC10.86□□□□□ -0.67
MACF1Q9UPN3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 AC148477.6-201ENST00000623746 465 ntBASIC10.86□□□□□ -0.67
MACF1Q9UPN3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC10.86□□□□□ -0.67
MACF1Q9UPN3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 AC026202.3-201ENST00000600805 1127 ntBASIC10.85□□□□□ -0.67
MACF1Q9UPN3 SMPD5-203ENST00000639008 1464 ntBASIC10.85□□□□□ -0.67
MACF1Q9UPN3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 AL136116.3-201ENST00000402907 1138 ntBASIC10.85□□□□□ -0.67
MACF1Q9UPN3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC10.85□□□□□ -0.67
MACF1Q9UPN3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 ANKRD20A6P-201ENST00000618763 204 ntBASIC10.84□□□□□ -0.67
MACF1Q9UPN3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC10.84□□□□□ -0.67
MACF1Q9UPN3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.67
MACF1Q9UPN3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
MACF1Q9UPN3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
MACF1Q9UPN3 AC074183.2-201ENST00000623112 922 ntBASIC10.83□□□□□ -0.68
MACF1Q9UPN3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms