Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC008813.1-201ENST00000536597 885 ntBASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NOTCH3Q9UM47 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.45■□□□□ 0.7
NOTCH3Q9UM47 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NOTCH3Q9UM47 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 AC092296.2-201ENST00000589470 999 ntBASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NOTCH3Q9UM47 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 RARRES2P1-201ENST00000474487 481 ntBASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 MIR219A2-201ENST00000608502 1504 ntBASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NOTCH3Q9UM47 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NOTCH3Q9UM47 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.4■□□□□ 0.7
NOTCH3Q9UM47 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NOTCH3Q9UM47 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 AC110285.7-201ENST00000624417 1536 ntBASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 ATP5G2P3-201ENST00000429083 425 ntBASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NOTCH3Q9UM47 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NOTCH3Q9UM47 AC004987.1-201ENST00000428627 508 ntBASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NOTCH3Q9UM47 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NOTCH3Q9UM47 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NOTCH3Q9UM47 AL135925.1-201ENST00000605920 1701 ntBASIC19.33■□□□□ 0.68
NOTCH3Q9UM47 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 U85056.1-201ENST00000616429 682 ntBASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NOTCH3Q9UM47 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 AL035685.1-201ENST00000636663 812 ntBASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NOTCH3Q9UM47 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.3■□□□□ 0.68
NOTCH3Q9UM47 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NOTCH3Q9UM47 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms