Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CDK5RAP1Q96SZ6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 AC100797.4-201ENST00000631653 1827 ntBASIC26.53■■□□□ 1.84
CDK5RAP1Q96SZ6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDK5RAP1Q96SZ6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
CDK5RAP1Q96SZ6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.52■■□□□ 1.84
CDK5RAP1Q96SZ6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDK5RAP1Q96SZ6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.52■■□□□ 1.84
CDK5RAP1Q96SZ6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDK5RAP1Q96SZ6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CDK5RAP1Q96SZ6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
CDK5RAP1Q96SZ6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CDK5RAP1Q96SZ6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.5■■□□□ 1.83
CDK5RAP1Q96SZ6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
CDK5RAP1Q96SZ6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CDK5RAP1Q96SZ6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.48■■□□□ 1.83
CDK5RAP1Q96SZ6 AC148477.6-201ENST00000623746 465 ntBASIC26.48■■□□□ 1.83
CDK5RAP1Q96SZ6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDK5RAP1Q96SZ6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CDK5RAP1Q96SZ6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDK5RAP1Q96SZ6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDK5RAP1Q96SZ6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
CDK5RAP1Q96SZ6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDK5RAP1Q96SZ6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.47■■□□□ 1.83
CDK5RAP1Q96SZ6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDK5RAP1Q96SZ6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.45■■□□□ 1.82
CDK5RAP1Q96SZ6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDK5RAP1Q96SZ6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDK5RAP1Q96SZ6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDK5RAP1Q96SZ6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDK5RAP1Q96SZ6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.43■■□□□ 1.82
CDK5RAP1Q96SZ6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDK5RAP1Q96SZ6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.42■■□□□ 1.82
CDK5RAP1Q96SZ6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CDK5RAP1Q96SZ6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDK5RAP1Q96SZ6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CDK5RAP1Q96SZ6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.41■■□□□ 1.82
CDK5RAP1Q96SZ6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CDK5RAP1Q96SZ6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.4■■□□□ 1.82
CDK5RAP1Q96SZ6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.39■■□□□ 1.82
CDK5RAP1Q96SZ6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDK5RAP1Q96SZ6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP1Q96SZ6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP1Q96SZ6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 AP002414.2-202ENST00000590929 1450 ntBASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP1Q96SZ6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 MIR219A2-201ENST00000608502 1504 ntBASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.36■■□□□ 1.81
CDK5RAP1Q96SZ6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDK5RAP1Q96SZ6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CDK5RAP1Q96SZ6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP1Q96SZ6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP1Q96SZ6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP1Q96SZ6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CDK5RAP1Q96SZ6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP1Q96SZ6 HSD17B1P1-201ENST00000590052 955 ntBASIC26.33■■□□□ 1.81
CDK5RAP1Q96SZ6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDK5RAP1Q96SZ6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.32■■□□□ 1.8
CDK5RAP1Q96SZ6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP1Q96SZ6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.31■■□□□ 1.8
CDK5RAP1Q96SZ6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.31■■□□□ 1.8
CDK5RAP1Q96SZ6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP1Q96SZ6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP1Q96SZ6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP1Q96SZ6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP1Q96SZ6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms