Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL21A1Q96P44 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL21A1Q96P44 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL21A1Q96P44 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL21A1Q96P44 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL21A1Q96P44 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL21A1Q96P44 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL21A1Q96P44 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL21A1Q96P44 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.83■■□□□ 1.4
COL21A1Q96P44 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.4
COL21A1Q96P44 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL21A1Q96P44 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.82■■□□□ 1.4
COL21A1Q96P44 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
COL21A1Q96P44 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL21A1Q96P44 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.82■■□□□ 1.4
COL21A1Q96P44 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL21A1Q96P44 AL121749.1-202ENST00000609313 2153 ntBASIC23.81■■□□□ 1.4
COL21A1Q96P44 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL21A1Q96P44 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL21A1Q96P44 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL21A1Q96P44 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
COL21A1Q96P44 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL21A1Q96P44 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
COL21A1Q96P44 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.8■■□□□ 1.4
COL21A1Q96P44 LINC00273-201ENST00000539813 1452 ntBASIC23.8■■□□□ 1.4
COL21A1Q96P44 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL21A1Q96P44 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL21A1Q96P44 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.79■■□□□ 1.4
COL21A1Q96P44 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL21A1Q96P44 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.79■■□□□ 1.4
COL21A1Q96P44 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL21A1Q96P44 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL21A1Q96P44 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.78■■□□□ 1.4
COL21A1Q96P44 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL21A1Q96P44 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COL21A1Q96P44 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
COL21A1Q96P44 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
COL21A1Q96P44 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL21A1Q96P44 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL21A1Q96P44 AC100797.4-201ENST00000631653 1827 ntBASIC23.77■■□□□ 1.4
COL21A1Q96P44 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
COL21A1Q96P44 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
COL21A1Q96P44 ABHD17AP4-201ENST00000411545 909 ntBASIC23.77■■□□□ 1.4
COL21A1Q96P44 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL21A1Q96P44 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL21A1Q96P44 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.76■■□□□ 1.39
COL21A1Q96P44 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL21A1Q96P44 BX255925.1-201ENST00000566954 1854 ntBASIC23.75■■□□□ 1.39
COL21A1Q96P44 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.75■■□□□ 1.39
COL21A1Q96P44 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.75■■□□□ 1.39
COL21A1Q96P44 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL21A1Q96P44 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL21A1Q96P44 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL21A1Q96P44 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL21A1Q96P44 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 ZNRF2P2-203ENST00000454624 420 ntBASIC23.73■■□□□ 1.39
COL21A1Q96P44 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL21A1Q96P44 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL21A1Q96P44 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL21A1Q96P44 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL21A1Q96P44 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.72■■□□□ 1.39
COL21A1Q96P44 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.72■■□□□ 1.39
COL21A1Q96P44 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.72■■□□□ 1.39
COL21A1Q96P44 AC135983.2-203ENST00000454486 1613 ntBASIC23.72■■□□□ 1.39
COL21A1Q96P44 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL21A1Q96P44 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL21A1Q96P44 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL21A1Q96P44 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.39
COL21A1Q96P44 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL21A1Q96P44 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL21A1Q96P44 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.69■■□□□ 1.38
COL21A1Q96P44 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.69■■□□□ 1.38
COL21A1Q96P44 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL21A1Q96P44 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL21A1Q96P44 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL21A1Q96P44 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL21A1Q96P44 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL21A1Q96P44 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL21A1Q96P44 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
COL21A1Q96P44 WHAMMP2-203ENST00000563942 1603 ntBASIC23.67■■□□□ 1.38
COL21A1Q96P44 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
COL21A1Q96P44 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.67■■□□□ 1.38
COL21A1Q96P44 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL21A1Q96P44 LINC01003-201ENST00000564834 1764 ntBASIC23.66■■□□□ 1.38
COL21A1Q96P44 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.66■■□□□ 1.38
COL21A1Q96P44 LINC01971-201ENST00000617888 1048 ntBASIC23.66■■□□□ 1.38
COL21A1Q96P44 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL21A1Q96P44 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.65■■□□□ 1.38
COL21A1Q96P44 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL21A1Q96P44 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL21A1Q96P44 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms