Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
LRCH3Q96II8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
LRCH3Q96II8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
LRCH3Q96II8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
LRCH3Q96II8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.95■■■□□ 2.06
LRCH3Q96II8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
LRCH3Q96II8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
LRCH3Q96II8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.93■■■□□ 2.06
LRCH3Q96II8 RP9P-202ENST00000450133 1212 ntBASIC27.93■■■□□ 2.06
LRCH3Q96II8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.93■■■□□ 2.06
LRCH3Q96II8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.92■■■□□ 2.06
LRCH3Q96II8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
LRCH3Q96II8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
LRCH3Q96II8 AC010980.1-201ENST00000587192 1142 ntBASIC27.92■■■□□ 2.06
LRCH3Q96II8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.92■■■□□ 2.06
LRCH3Q96II8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
LRCH3Q96II8 AC148477.6-201ENST00000623746 465 ntBASIC27.91■■■□□ 2.06
LRCH3Q96II8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
LRCH3Q96II8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.9■■■□□ 2.06
LRCH3Q96II8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
LRCH3Q96II8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
LRCH3Q96II8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
LRCH3Q96II8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.89■■■□□ 2.06
LRCH3Q96II8 AL356441.2-201ENST00000443009 864 ntBASIC27.89■■■□□ 2.06
LRCH3Q96II8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.89■■■□□ 2.06
LRCH3Q96II8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
LRCH3Q96II8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
LRCH3Q96II8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.88■■■□□ 2.05
LRCH3Q96II8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
LRCH3Q96II8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LRCH3Q96II8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
LRCH3Q96II8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
LRCH3Q96II8 AC009831.1-201ENST00000580420 1582 ntBASIC27.86■■■□□ 2.05
LRCH3Q96II8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
LRCH3Q96II8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
LRCH3Q96II8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
LRCH3Q96II8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
LRCH3Q96II8 BHLHE23-202ENST00000612929 1109 ntBASIC27.85■■■□□ 2.05
LRCH3Q96II8 AC133552.2-201ENST00000619106 1032 ntBASIC27.85■■■□□ 2.05
LRCH3Q96II8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
LRCH3Q96II8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
LRCH3Q96II8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
LRCH3Q96II8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.83■■■□□ 2.05
LRCH3Q96II8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
LRCH3Q96II8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.82■■■□□ 2.04
LRCH3Q96II8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
LRCH3Q96II8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.81■■■□□ 2.04
LRCH3Q96II8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.81■■■□□ 2.04
LRCH3Q96II8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LRCH3Q96II8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LRCH3Q96II8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LRCH3Q96II8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LRCH3Q96II8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.8■■■□□ 2.04
LRCH3Q96II8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LRCH3Q96II8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LRCH3Q96II8 MIR219A2-201ENST00000608502 1504 ntBASIC27.78■■■□□ 2.04
LRCH3Q96II8 AC008406.3-201ENST00000620001 1374 ntBASIC27.78■■■□□ 2.04
LRCH3Q96II8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
LRCH3Q96II8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.78■■■□□ 2.04
LRCH3Q96II8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.78■■■□□ 2.04
LRCH3Q96II8 AC007029.1-201ENST00000604183 313 ntBASIC27.78■■■□□ 2.04
LRCH3Q96II8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.77■■■□□ 2.04
LRCH3Q96II8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.77■■■□□ 2.04
LRCH3Q96II8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.77■■■□□ 2.04
LRCH3Q96II8 AC103834.1-201ENST00000520383 144 ntBASIC27.77■■■□□ 2.04
LRCH3Q96II8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.77■■■□□ 2.04
LRCH3Q96II8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
LRCH3Q96II8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
LRCH3Q96II8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LRCH3Q96II8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LRCH3Q96II8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LRCH3Q96II8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.76■■■□□ 2.03
LRCH3Q96II8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
LRCH3Q96II8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
LRCH3Q96II8 YBX1P4-201ENST00000392794 808 ntBASIC27.75■■■□□ 2.03
LRCH3Q96II8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.75■■■□□ 2.03
LRCH3Q96II8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.75■■■□□ 2.03
LRCH3Q96II8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LRCH3Q96II8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LRCH3Q96II8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.73■■■□□ 2.03
LRCH3Q96II8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.73■■■□□ 2.03
LRCH3Q96II8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.73■■■□□ 2.03
LRCH3Q96II8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.73■■■□□ 2.03
LRCH3Q96II8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LRCH3Q96II8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
LRCH3Q96II8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.72■■■□□ 2.03
LRCH3Q96II8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.71■■■□□ 2.03
LRCH3Q96II8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LRCH3Q96II8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
LRCH3Q96II8 DUX4L9-201ENST00000449051 1259 ntBASIC27.71■■■□□ 2.03
LRCH3Q96II8 AL157400.5-201ENST00000507624 621 ntBASIC27.71■■■□□ 2.03
LRCH3Q96II8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
LRCH3Q96II8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
LRCH3Q96II8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
LRCH3Q96II8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
LRCH3Q96II8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.68■■■□□ 2.02
LRCH3Q96II8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
LRCH3Q96II8 MIR638-201ENST00000385237 100 ntBASIC27.67■■■□□ 2.02
LRCH3Q96II8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.67■■■□□ 2.02
LRCH3Q96II8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms