Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
TMC1Q8TDI8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
TMC1Q8TDI8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
TMC1Q8TDI8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC35.49■■■■□ 3.27
TMC1Q8TDI8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
TMC1Q8TDI8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
TMC1Q8TDI8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
TMC1Q8TDI8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
TMC1Q8TDI8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
TMC1Q8TDI8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC35.47■■■■□ 3.27
TMC1Q8TDI8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.46■■■■□ 3.27
TMC1Q8TDI8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
TMC1Q8TDI8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC35.45■■■■□ 3.27
TMC1Q8TDI8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
TMC1Q8TDI8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC35.44■■■■□ 3.26
TMC1Q8TDI8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
TMC1Q8TDI8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
TMC1Q8TDI8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
TMC1Q8TDI8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
TMC1Q8TDI8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC35.41■■■■□ 3.26
TMC1Q8TDI8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
TMC1Q8TDI8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
TMC1Q8TDI8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
TMC1Q8TDI8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.4■■■■□ 3.26
TMC1Q8TDI8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC35.4■■■■□ 3.26
TMC1Q8TDI8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC35.4■■■■□ 3.26
TMC1Q8TDI8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
TMC1Q8TDI8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
TMC1Q8TDI8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC35.39■■■■□ 3.26
TMC1Q8TDI8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
TMC1Q8TDI8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
TMC1Q8TDI8 AC008813.1-201ENST00000536597 885 ntBASIC35.39■■■■□ 3.26
TMC1Q8TDI8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
TMC1Q8TDI8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.38■■■■□ 3.26
TMC1Q8TDI8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
TMC1Q8TDI8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC35.38■■■■□ 3.25
TMC1Q8TDI8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
TMC1Q8TDI8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
TMC1Q8TDI8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
TMC1Q8TDI8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.37■■■■□ 3.25
TMC1Q8TDI8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
TMC1Q8TDI8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
TMC1Q8TDI8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
TMC1Q8TDI8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
TMC1Q8TDI8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
TMC1Q8TDI8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
TMC1Q8TDI8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
TMC1Q8TDI8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC35.35■■■■□ 3.25
TMC1Q8TDI8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC35.35■■■■□ 3.25
TMC1Q8TDI8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
TMC1Q8TDI8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC35.34■■■■□ 3.25
TMC1Q8TDI8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
TMC1Q8TDI8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC35.34■■■■□ 3.25
TMC1Q8TDI8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC35.33■■■■□ 3.25
TMC1Q8TDI8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
TMC1Q8TDI8 GPX1-201ENST00000419349 1106 ntBASIC35.32■■■■□ 3.24
TMC1Q8TDI8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
TMC1Q8TDI8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC35.32■■■■□ 3.24
TMC1Q8TDI8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC35.31■■■■□ 3.24
TMC1Q8TDI8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
TMC1Q8TDI8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC35.31■■■■□ 3.24
TMC1Q8TDI8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC35.3■■■■□ 3.24
TMC1Q8TDI8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC35.3■■■■□ 3.24
TMC1Q8TDI8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
TMC1Q8TDI8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC35.28■■■■□ 3.24
TMC1Q8TDI8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC35.28■■■■□ 3.24
TMC1Q8TDI8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35.28■■■■□ 3.24
TMC1Q8TDI8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC35.28■■■■□ 3.24
TMC1Q8TDI8 AL139393.2-201ENST00000608721 2025 ntBASIC35.27■■■■□ 3.24
TMC1Q8TDI8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TMC1Q8TDI8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC35.27■■■■□ 3.24
TMC1Q8TDI8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
TMC1Q8TDI8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
TMC1Q8TDI8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC35.26■■■■□ 3.24
TMC1Q8TDI8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
TMC1Q8TDI8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.23
TMC1Q8TDI8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC35.25■■■■□ 3.23
TMC1Q8TDI8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC35.25■■■■□ 3.23
TMC1Q8TDI8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
TMC1Q8TDI8 AC100797.4-201ENST00000631653 1827 ntBASIC35.25■■■■□ 3.23
TMC1Q8TDI8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
TMC1Q8TDI8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
TMC1Q8TDI8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC35.24■■■■□ 3.23
TMC1Q8TDI8 AP004833.2-201ENST00000532228 1454 ntBASIC35.23■■■■□ 3.23
TMC1Q8TDI8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC35.23■■■■□ 3.23
TMC1Q8TDI8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
TMC1Q8TDI8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
TMC1Q8TDI8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
TMC1Q8TDI8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
TMC1Q8TDI8 AC022413.1-201ENST00000624602 984 ntBASIC35.21■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms