Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM2Q8N967 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.78■□□□□ 0.92
LRTM2Q8N967 AC145676.1-201ENST00000514988 2004 ntBASIC20.78■□□□□ 0.92
LRTM2Q8N967 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.77■□□□□ 0.92
LRTM2Q8N967 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM2Q8N967 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
LRTM2Q8N967 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LRTM2Q8N967 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
LRTM2Q8N967 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRTM2Q8N967 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM2Q8N967 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM2Q8N967 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM2Q8N967 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM2Q8N967 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.76■□□□□ 0.91
LRTM2Q8N967 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM2Q8N967 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRTM2Q8N967 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM2Q8N967 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM2Q8N967 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM2Q8N967 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM2Q8N967 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.75■□□□□ 0.91
LRTM2Q8N967 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.74■□□□□ 0.91
LRTM2Q8N967 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.74■□□□□ 0.91
LRTM2Q8N967 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.74■□□□□ 0.91
LRTM2Q8N967 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM2Q8N967 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LRTM2Q8N967 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM2Q8N967 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM2Q8N967 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM2Q8N967 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM2Q8N967 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRTM2Q8N967 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM2Q8N967 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
LRTM2Q8N967 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.72■□□□□ 0.91
LRTM2Q8N967 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRTM2Q8N967 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.71■□□□□ 0.91
LRTM2Q8N967 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM2Q8N967 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.7■□□□□ 0.91
LRTM2Q8N967 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LRTM2Q8N967 AC020928.2-201ENST00000588717 2197 ntBASIC20.7■□□□□ 0.91
LRTM2Q8N967 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRTM2Q8N967 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.7■□□□□ 0.9
LRTM2Q8N967 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LRTM2Q8N967 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRTM2Q8N967 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM2Q8N967 AC018358.1-201ENST00000631079 1402 ntBASIC20.7■□□□□ 0.9
LRTM2Q8N967 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM2Q8N967 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM2Q8N967 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM2Q8N967 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM2Q8N967 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.68■□□□□ 0.9
LRTM2Q8N967 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.68■□□□□ 0.9
LRTM2Q8N967 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM2Q8N967 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRTM2Q8N967 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM2Q8N967 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM2Q8N967 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LRTM2Q8N967 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRTM2Q8N967 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.67■□□□□ 0.9
LRTM2Q8N967 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.66■□□□□ 0.9
LRTM2Q8N967 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM2Q8N967 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM2Q8N967 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM2Q8N967 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM2Q8N967 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LRTM2Q8N967 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRTM2Q8N967 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM2Q8N967 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRTM2Q8N967 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRTM2Q8N967 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRTM2Q8N967 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRTM2Q8N967 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM2Q8N967 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.64■□□□□ 0.89
LRTM2Q8N967 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM2Q8N967 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRTM2Q8N967 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LRTM2Q8N967 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
LRTM2Q8N967 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM2Q8N967 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRTM2Q8N967 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.62■□□□□ 0.89
LRTM2Q8N967 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.62■□□□□ 0.89
LRTM2Q8N967 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM2Q8N967 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.61■□□□□ 0.89
LRTM2Q8N967 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
LRTM2Q8N967 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.61■□□□□ 0.89
LRTM2Q8N967 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM2Q8N967 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.61■□□□□ 0.89
LRTM2Q8N967 DUSP8P4-201ENST00000399538 1761 ntBASIC20.61■□□□□ 0.89
LRTM2Q8N967 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.61■□□□□ 0.89
LRTM2Q8N967 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.6■□□□□ 0.89
LRTM2Q8N967 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM2Q8N967 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.6■□□□□ 0.89
LRTM2Q8N967 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM2Q8N967 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms