Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPRX1Q8N7U7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPRX1Q8N7U7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TPRX1Q8N7U7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPRX1Q8N7U7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.2■□□□□ 0.98
TPRX1Q8N7U7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.2■□□□□ 0.98
TPRX1Q8N7U7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TPRX1Q8N7U7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TPRX1Q8N7U7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.19■□□□□ 0.98
TPRX1Q8N7U7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TPRX1Q8N7U7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPRX1Q8N7U7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.17■□□□□ 0.98
TPRX1Q8N7U7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.17■□□□□ 0.98
TPRX1Q8N7U7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.17■□□□□ 0.98
TPRX1Q8N7U7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPRX1Q8N7U7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPRX1Q8N7U7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TPRX1Q8N7U7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPRX1Q8N7U7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPRX1Q8N7U7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
TPRX1Q8N7U7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TPRX1Q8N7U7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPRX1Q8N7U7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPRX1Q8N7U7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TPRX1Q8N7U7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.13■□□□□ 0.97
TPRX1Q8N7U7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.13■□□□□ 0.97
TPRX1Q8N7U7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TPRX1Q8N7U7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPRX1Q8N7U7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPRX1Q8N7U7 AP002414.2-202ENST00000590929 1450 ntBASIC21.12■□□□□ 0.97
TPRX1Q8N7U7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.11■□□□□ 0.97
TPRX1Q8N7U7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPRX1Q8N7U7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPRX1Q8N7U7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPRX1Q8N7U7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TPRX1Q8N7U7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPRX1Q8N7U7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPRX1Q8N7U7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TPRX1Q8N7U7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPRX1Q8N7U7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TPRX1Q8N7U7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPRX1Q8N7U7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TPRX1Q8N7U7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPRX1Q8N7U7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.09■□□□□ 0.97
TPRX1Q8N7U7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TPRX1Q8N7U7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPRX1Q8N7U7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.08■□□□□ 0.97
TPRX1Q8N7U7 BX255925.1-201ENST00000566954 1854 ntBASIC21.07■□□□□ 0.96
TPRX1Q8N7U7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPRX1Q8N7U7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.07■□□□□ 0.96
TPRX1Q8N7U7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TPRX1Q8N7U7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 LINC01003-201ENST00000564834 1764 ntBASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TPRX1Q8N7U7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPRX1Q8N7U7 AC110285.7-201ENST00000624417 1536 ntBASIC21.05■□□□□ 0.96
TPRX1Q8N7U7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPRX1Q8N7U7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TPRX1Q8N7U7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TPRX1Q8N7U7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TPRX1Q8N7U7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TPRX1Q8N7U7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TPRX1Q8N7U7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPRX1Q8N7U7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPRX1Q8N7U7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TPRX1Q8N7U7 ZNRF2P2-203ENST00000454624 420 ntBASIC21.03■□□□□ 0.96
TPRX1Q8N7U7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TPRX1Q8N7U7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.02■□□□□ 0.96
TPRX1Q8N7U7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPRX1Q8N7U7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPRX1Q8N7U7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TPRX1Q8N7U7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPRX1Q8N7U7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.01■□□□□ 0.95
TPRX1Q8N7U7 LINC01971-201ENST00000617888 1048 ntBASIC21.01■□□□□ 0.95
TPRX1Q8N7U7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21■□□□□ 0.95
TPRX1Q8N7U7 ABHD17AP4-201ENST00000411545 909 ntBASIC21■□□□□ 0.95
TPRX1Q8N7U7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21■□□□□ 0.95
TPRX1Q8N7U7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21■□□□□ 0.95
TPRX1Q8N7U7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPRX1Q8N7U7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TPRX1Q8N7U7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPRX1Q8N7U7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPRX1Q8N7U7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPRX1Q8N7U7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms