Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHPFQ8IZ52 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CHPFQ8IZ52 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.97■■□□□ 1.75
CHPFQ8IZ52 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CHPFQ8IZ52 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CHPFQ8IZ52 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHPFQ8IZ52 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CHPFQ8IZ52 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.95■■□□□ 1.75
CHPFQ8IZ52 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
CHPFQ8IZ52 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CHPFQ8IZ52 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.95■■□□□ 1.74
CHPFQ8IZ52 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
CHPFQ8IZ52 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
CHPFQ8IZ52 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.94■■□□□ 1.74
CHPFQ8IZ52 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHPFQ8IZ52 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CHPFQ8IZ52 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.93■■□□□ 1.74
CHPFQ8IZ52 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.93■■□□□ 1.74
CHPFQ8IZ52 AC148477.6-201ENST00000623746 465 ntBASIC25.93■■□□□ 1.74
CHPFQ8IZ52 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CHPFQ8IZ52 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CHPFQ8IZ52 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CHPFQ8IZ52 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.92■■□□□ 1.74
CHPFQ8IZ52 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.92■■□□□ 1.74
CHPFQ8IZ52 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHPFQ8IZ52 ST7-AS1-201ENST00000456775 1889 ntBASIC25.91■■□□□ 1.74
CHPFQ8IZ52 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.9■■□□□ 1.74
CHPFQ8IZ52 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
CHPFQ8IZ52 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHPFQ8IZ52 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHPFQ8IZ52 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.89■■□□□ 1.74
CHPFQ8IZ52 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHPFQ8IZ52 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.89■■□□□ 1.74
CHPFQ8IZ52 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CHPFQ8IZ52 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHPFQ8IZ52 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHPFQ8IZ52 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
CHPFQ8IZ52 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHPFQ8IZ52 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.87■■□□□ 1.73
CHPFQ8IZ52 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHPFQ8IZ52 MIR219A2-201ENST00000608502 1504 ntBASIC25.87■■□□□ 1.73
CHPFQ8IZ52 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.86■■□□□ 1.73
CHPFQ8IZ52 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHPFQ8IZ52 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.86■■□□□ 1.73
CHPFQ8IZ52 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.86■■□□□ 1.73
CHPFQ8IZ52 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CHPFQ8IZ52 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
CHPFQ8IZ52 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CHPFQ8IZ52 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHPFQ8IZ52 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.84■■□□□ 1.73
CHPFQ8IZ52 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CHPFQ8IZ52 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHPFQ8IZ52 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHPFQ8IZ52 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHPFQ8IZ52 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHPFQ8IZ52 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHPFQ8IZ52 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CHPFQ8IZ52 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHPFQ8IZ52 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHPFQ8IZ52 AC060814.1-201ENST00000554326 538 ntBASIC25.81■■□□□ 1.72
CHPFQ8IZ52 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHPFQ8IZ52 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHPFQ8IZ52 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.8■■□□□ 1.72
CHPFQ8IZ52 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CHPFQ8IZ52 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHPFQ8IZ52 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHPFQ8IZ52 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CHPFQ8IZ52 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.79■■□□□ 1.72
CHPFQ8IZ52 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.79■■□□□ 1.72
CHPFQ8IZ52 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CHPFQ8IZ52 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CHPFQ8IZ52 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHPFQ8IZ52 AP004833.2-201ENST00000532228 1454 ntBASIC25.78■■□□□ 1.72
CHPFQ8IZ52 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHPFQ8IZ52 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHPFQ8IZ52 NTF6A-201ENST00000591175 560 ntBASIC25.77■■□□□ 1.72
CHPFQ8IZ52 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHPFQ8IZ52 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHPFQ8IZ52 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHPFQ8IZ52 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CHPFQ8IZ52 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHPFQ8IZ52 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHPFQ8IZ52 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.75■■□□□ 1.71
CHPFQ8IZ52 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHPFQ8IZ52 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CHPFQ8IZ52 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHPFQ8IZ52 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHPFQ8IZ52 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHPFQ8IZ52 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHPFQ8IZ52 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CHPFQ8IZ52 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHPFQ8IZ52 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHPFQ8IZ52 ABCB10P1-201ENST00000614297 2181 ntBASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms