Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CPNE9Q8IYJ1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CPNE9Q8IYJ1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPNE9Q8IYJ1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE9Q8IYJ1 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPNE9Q8IYJ1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 AP002414.2-202ENST00000590929 1450 ntBASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.05■■□□□ 1.6
CPNE9Q8IYJ1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPNE9Q8IYJ1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPNE9Q8IYJ1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPNE9Q8IYJ1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPNE9Q8IYJ1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPNE9Q8IYJ1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPNE9Q8IYJ1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
CPNE9Q8IYJ1 BX255925.1-201ENST00000566954 1854 ntBASIC25.01■■□□□ 1.59
CPNE9Q8IYJ1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.01■■□□□ 1.59
CPNE9Q8IYJ1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPNE9Q8IYJ1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPNE9Q8IYJ1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPNE9Q8IYJ1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25■■□□□ 1.59
CPNE9Q8IYJ1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPNE9Q8IYJ1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPNE9Q8IYJ1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.99■■□□□ 1.59
CPNE9Q8IYJ1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CPNE9Q8IYJ1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 LINC01003-201ENST00000564834 1764 ntBASIC24.98■■□□□ 1.59
CPNE9Q8IYJ1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CPNE9Q8IYJ1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.96■■□□□ 1.59
CPNE9Q8IYJ1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.96■■□□□ 1.59
CPNE9Q8IYJ1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CPNE9Q8IYJ1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.95■■□□□ 1.58
CPNE9Q8IYJ1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.95■■□□□ 1.58
CPNE9Q8IYJ1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CPNE9Q8IYJ1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
CPNE9Q8IYJ1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CPNE9Q8IYJ1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPNE9Q8IYJ1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CPNE9Q8IYJ1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CPNE9Q8IYJ1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CPNE9Q8IYJ1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE9Q8IYJ1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CPNE9Q8IYJ1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CPNE9Q8IYJ1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
CPNE9Q8IYJ1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CPNE9Q8IYJ1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.89■■□□□ 1.58
CPNE9Q8IYJ1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CPNE9Q8IYJ1 AC110285.7-201ENST00000624417 1536 ntBASIC24.87■■□□□ 1.57
CPNE9Q8IYJ1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE9Q8IYJ1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CPNE9Q8IYJ1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CPNE9Q8IYJ1 AC018358.1-201ENST00000631079 1402 ntBASIC24.86■■□□□ 1.57
CPNE9Q8IYJ1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CPNE9Q8IYJ1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CPNE9Q8IYJ1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CPNE9Q8IYJ1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.84■■□□□ 1.57
CPNE9Q8IYJ1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.84■■□□□ 1.57
CPNE9Q8IYJ1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CPNE9Q8IYJ1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CPNE9Q8IYJ1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CPNE9Q8IYJ1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 AL121749.1-202ENST00000609313 2153 ntBASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 AC135731.1-201ENST00000569415 2548 ntBASIC24.82■■□□□ 1.56
CPNE9Q8IYJ1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms