Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF440Q8IYI8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.23■■□□□ 1.31
ZNF440Q8IYI8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF440Q8IYI8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF440Q8IYI8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZNF440Q8IYI8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ZNF440Q8IYI8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
ZNF440Q8IYI8 LINC01003-201ENST00000564834 1764 ntBASIC23.21■■□□□ 1.31
ZNF440Q8IYI8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF440Q8IYI8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.2■■□□□ 1.3
ZNF440Q8IYI8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZNF440Q8IYI8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZNF440Q8IYI8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF440Q8IYI8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF440Q8IYI8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF440Q8IYI8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZNF440Q8IYI8 AC018358.1-201ENST00000631079 1402 ntBASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ZNF440Q8IYI8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ZNF440Q8IYI8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.15■■□□□ 1.3
ZNF440Q8IYI8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ZNF440Q8IYI8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ZNF440Q8IYI8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.14■■□□□ 1.3
ZNF440Q8IYI8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.14■■□□□ 1.29
ZNF440Q8IYI8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF440Q8IYI8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF440Q8IYI8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.12■■□□□ 1.29
ZNF440Q8IYI8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.12■■□□□ 1.29
ZNF440Q8IYI8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF440Q8IYI8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF440Q8IYI8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF440Q8IYI8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ZNF440Q8IYI8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.11■■□□□ 1.29
ZNF440Q8IYI8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 AC110285.7-201ENST00000624417 1536 ntBASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF440Q8IYI8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF440Q8IYI8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZNF440Q8IYI8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZNF440Q8IYI8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ZNF440Q8IYI8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.07■■□□□ 1.28
ZNF440Q8IYI8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZNF440Q8IYI8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZNF440Q8IYI8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 LINC01971-201ENST00000617888 1048 ntBASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ZNF440Q8IYI8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZNF440Q8IYI8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.05■■□□□ 1.28
ZNF440Q8IYI8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.05■■□□□ 1.28
ZNF440Q8IYI8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZNF440Q8IYI8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZNF440Q8IYI8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZNF440Q8IYI8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.03■■□□□ 1.28
ZNF440Q8IYI8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ZNF440Q8IYI8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.03■■□□□ 1.28
ZNF440Q8IYI8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.03■■□□□ 1.28
ZNF440Q8IYI8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF440Q8IYI8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZNF440Q8IYI8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms