Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.06■■□□□ 1.76
CCDC25Q86WR0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CCDC25Q86WR0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
CCDC25Q86WR0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCDC25Q86WR0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.05■■□□□ 1.76
CCDC25Q86WR0 AC135731.1-201ENST00000569415 2548 ntBASIC26.04■■□□□ 1.76
CCDC25Q86WR0 AL391121.1-201ENST00000607967 1349 ntBASIC26.04■■□□□ 1.76
CCDC25Q86WR0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CCDC25Q86WR0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.03■■□□□ 1.76
CCDC25Q86WR0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC25Q86WR0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCDC25Q86WR0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CCDC25Q86WR0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC25Q86WR0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC25Q86WR0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CCDC25Q86WR0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC25Q86WR0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC25Q86WR0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC25Q86WR0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC25Q86WR0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26■■□□□ 1.75
CCDC25Q86WR0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.99■■□□□ 1.75
CCDC25Q86WR0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC25Q86WR0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.99■■□□□ 1.75
CCDC25Q86WR0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CCDC25Q86WR0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC25Q86WR0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC25Q86WR0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CCDC25Q86WR0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC25Q86WR0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.98■■□□□ 1.75
CCDC25Q86WR0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC25Q86WR0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
CCDC25Q86WR0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC25Q86WR0 AL449106.1-201ENST00000608517 1980 ntBASIC25.96■■□□□ 1.75
CCDC25Q86WR0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC25Q86WR0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC25Q86WR0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
CCDC25Q86WR0 CAHM-201ENST00000604200 896 ntBASIC25.95■■□□□ 1.74
CCDC25Q86WR0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.95■■□□□ 1.74
CCDC25Q86WR0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
CCDC25Q86WR0 AP002414.2-202ENST00000590929 1450 ntBASIC25.93■■□□□ 1.74
CCDC25Q86WR0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC25Q86WR0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC25Q86WR0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC25Q86WR0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCDC25Q86WR0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC25Q86WR0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC25Q86WR0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC25Q86WR0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC25Q86WR0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.91■■□□□ 1.74
CCDC25Q86WR0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC25Q86WR0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC25Q86WR0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC25Q86WR0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC25Q86WR0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.89■■□□□ 1.74
CCDC25Q86WR0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CCDC25Q86WR0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.89■■□□□ 1.73
CCDC25Q86WR0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.89■■□□□ 1.73
CCDC25Q86WR0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC25Q86WR0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC25Q86WR0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CCDC25Q86WR0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC25Q86WR0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC25Q86WR0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC25Q86WR0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC25Q86WR0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC25Q86WR0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC25Q86WR0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC25Q86WR0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC25Q86WR0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CCDC25Q86WR0 AC136428.2-201ENST00000563187 214 ntBASIC25.85■■□□□ 1.73
CCDC25Q86WR0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC25Q86WR0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC25Q86WR0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC25Q86WR0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.84■■□□□ 1.73
CCDC25Q86WR0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC25Q86WR0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC25Q86WR0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC25Q86WR0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.83■■□□□ 1.73
CCDC25Q86WR0 AC097358.2-201ENST00000607541 1159 ntBASIC25.83■■□□□ 1.73
CCDC25Q86WR0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC25Q86WR0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.83■■□□□ 1.73
CCDC25Q86WR0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CCDC25Q86WR0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC25Q86WR0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC25Q86WR0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC25Q86WR0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC25Q86WR0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CCDC25Q86WR0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CCDC25Q86WR0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC25Q86WR0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC25Q86WR0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC25Q86WR0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms