Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LAPTM4BQ86VI4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.09■■□□□ 1.45
LAPTM4BQ86VI4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
LAPTM4BQ86VI4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LAPTM4BQ86VI4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.08■■□□□ 1.45
LAPTM4BQ86VI4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LAPTM4BQ86VI4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LAPTM4BQ86VI4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
LAPTM4BQ86VI4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LAPTM4BQ86VI4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
LAPTM4BQ86VI4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LAPTM4BQ86VI4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.07■■□□□ 1.44
LAPTM4BQ86VI4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LAPTM4BQ86VI4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LAPTM4BQ86VI4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.06■■□□□ 1.44
LAPTM4BQ86VI4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.06■■□□□ 1.44
LAPTM4BQ86VI4 AC110285.7-201ENST00000624417 1536 ntBASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 AL139393.2-201ENST00000608721 2025 ntBASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
LAPTM4BQ86VI4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LAPTM4BQ86VI4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.04■■□□□ 1.44
LAPTM4BQ86VI4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.04■■□□□ 1.44
LAPTM4BQ86VI4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.04■■□□□ 1.44
LAPTM4BQ86VI4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LAPTM4BQ86VI4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LAPTM4BQ86VI4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.03■■□□□ 1.44
LAPTM4BQ86VI4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LAPTM4BQ86VI4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LAPTM4BQ86VI4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LAPTM4BQ86VI4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LAPTM4BQ86VI4 AP004833.2-201ENST00000532228 1454 ntBASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LAPTM4BQ86VI4 AC100797.4-201ENST00000631653 1827 ntBASIC24■■□□□ 1.43
LAPTM4BQ86VI4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
LAPTM4BQ86VI4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
LAPTM4BQ86VI4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24■■□□□ 1.43
LAPTM4BQ86VI4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24■■□□□ 1.43
LAPTM4BQ86VI4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24■■□□□ 1.43
LAPTM4BQ86VI4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LAPTM4BQ86VI4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.99■■□□□ 1.43
LAPTM4BQ86VI4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
LAPTM4BQ86VI4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LAPTM4BQ86VI4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.97■■□□□ 1.43
LAPTM4BQ86VI4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LAPTM4BQ86VI4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
LAPTM4BQ86VI4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LAPTM4BQ86VI4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LAPTM4BQ86VI4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LAPTM4BQ86VI4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
LAPTM4BQ86VI4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
LAPTM4BQ86VI4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LAPTM4BQ86VI4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.95■■□□□ 1.42
LAPTM4BQ86VI4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
LAPTM4BQ86VI4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.94■■□□□ 1.42
LAPTM4BQ86VI4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.94■■□□□ 1.42
LAPTM4BQ86VI4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.94■■□□□ 1.42
LAPTM4BQ86VI4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LAPTM4BQ86VI4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LAPTM4BQ86VI4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LAPTM4BQ86VI4 AC008813.1-201ENST00000536597 885 ntBASIC23.92■■□□□ 1.42
LAPTM4BQ86VI4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.92■■□□□ 1.42
LAPTM4BQ86VI4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.92■■□□□ 1.42
LAPTM4BQ86VI4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
LAPTM4BQ86VI4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms