Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP4Q6PIL6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP4Q6PIL6 AC091060.1-201ENST00000623524 1766 ntBASIC19.57■□□□□ 0.72
KCNIP4Q6PIL6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
KCNIP4Q6PIL6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNIP4Q6PIL6 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.56■□□□□ 0.72
KCNIP4Q6PIL6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP4Q6PIL6 ZNRF2P1-201ENST00000441407 443 ntBASIC19.55■□□□□ 0.72
KCNIP4Q6PIL6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP4Q6PIL6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KCNIP4Q6PIL6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP4Q6PIL6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KCNIP4Q6PIL6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP4Q6PIL6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP4Q6PIL6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNIP4Q6PIL6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.52■□□□□ 0.71
KCNIP4Q6PIL6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
KCNIP4Q6PIL6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
KCNIP4Q6PIL6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
KCNIP4Q6PIL6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
KCNIP4Q6PIL6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.49■□□□□ 0.71
KCNIP4Q6PIL6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
KCNIP4Q6PIL6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP4Q6PIL6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP4Q6PIL6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KCNIP4Q6PIL6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.48■□□□□ 0.71
KCNIP4Q6PIL6 AC145676.1-201ENST00000514988 2004 ntBASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 LINC01003-201ENST00000564834 1764 ntBASIC19.47■□□□□ 0.71
KCNIP4Q6PIL6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.46■□□□□ 0.71
KCNIP4Q6PIL6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KCNIP4Q6PIL6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
KCNIP4Q6PIL6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCNIP4Q6PIL6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCNIP4Q6PIL6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms