Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.21■■□□□ 1.31
PGBD2Q6P3X8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PGBD2Q6P3X8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD2Q6P3X8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PGBD2Q6P3X8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PGBD2Q6P3X8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGBD2Q6P3X8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PGBD2Q6P3X8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.19■■□□□ 1.3
PGBD2Q6P3X8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PGBD2Q6P3X8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGBD2Q6P3X8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGBD2Q6P3X8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGBD2Q6P3X8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.18■■□□□ 1.3
PGBD2Q6P3X8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.18■■□□□ 1.3
PGBD2Q6P3X8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.18■■□□□ 1.3
PGBD2Q6P3X8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PGBD2Q6P3X8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD2Q6P3X8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGBD2Q6P3X8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.17■■□□□ 1.3
PGBD2Q6P3X8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.17■■□□□ 1.3
PGBD2Q6P3X8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD2Q6P3X8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGBD2Q6P3X8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 MIR762-201ENST00000390236 83 ntBASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PGBD2Q6P3X8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.14■■□□□ 1.29
PGBD2Q6P3X8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PGBD2Q6P3X8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PGBD2Q6P3X8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.13■■□□□ 1.29
PGBD2Q6P3X8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD2Q6P3X8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PGBD2Q6P3X8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PGBD2Q6P3X8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PGBD2Q6P3X8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PGBD2Q6P3X8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.09■■□□□ 1.29
PGBD2Q6P3X8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.09■■□□□ 1.29
PGBD2Q6P3X8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PGBD2Q6P3X8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.09■■□□□ 1.29
PGBD2Q6P3X8 AC135983.2-203ENST00000454486 1613 ntBASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.08■■□□□ 1.29
PGBD2Q6P3X8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PGBD2Q6P3X8 AC018358.1-201ENST00000631079 1402 ntBASIC23.08■■□□□ 1.28
PGBD2Q6P3X8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PGBD2Q6P3X8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.07■■□□□ 1.28
PGBD2Q6P3X8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PGBD2Q6P3X8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PGBD2Q6P3X8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD2Q6P3X8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.06■■□□□ 1.28
PGBD2Q6P3X8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD2Q6P3X8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD2Q6P3X8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PGBD2Q6P3X8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PGBD2Q6P3X8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 AL449106.1-201ENST00000608517 1980 ntBASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PGBD2Q6P3X8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PGBD2Q6P3X8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 WHAMMP2-203ENST00000563942 1603 ntBASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.02■■□□□ 1.28
PGBD2Q6P3X8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms