Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
UBE2AP49459 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBE2AP49459 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UBE2AP49459 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
UBE2AP49459 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2AP49459 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2AP49459 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBE2AP49459 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2AP49459 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC15.88■□□□□ 0.13
UBE2AP49459 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2AP49459 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2AP49459 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2AP49459 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2AP49459 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBE2AP49459 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.88■□□□□ 0.13
UBE2AP49459 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2AP49459 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBE2AP49459 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC15.87■□□□□ 0.13
UBE2AP49459 DUX4L28-201ENST00000623687 678 ntBASIC15.87■□□□□ 0.13
UBE2AP49459 DRD5P2-201ENST00000421395 2012 ntBASIC15.87■□□□□ 0.13
UBE2AP49459 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC15.87■□□□□ 0.13
UBE2AP49459 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UBE2AP49459 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UBE2AP49459 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC15.86■□□□□ 0.13
UBE2AP49459 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
UBE2AP49459 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.86■□□□□ 0.13
UBE2AP49459 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC15.86■□□□□ 0.13
UBE2AP49459 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UBE2AP49459 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC15.86■□□□□ 0.13
UBE2AP49459 EI24-212ENST00000615917 1407 ntTSL 2 BASIC15.85■□□□□ 0.13
UBE2AP49459 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
UBE2AP49459 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBE2AP49459 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC15.84■□□□□ 0.13
UBE2AP49459 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2AP49459 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2AP49459 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2AP49459 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2AP49459 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBE2AP49459 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
UBE2AP49459 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBE2AP49459 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2AP49459 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC15.83■□□□□ 0.12
UBE2AP49459 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBE2AP49459 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
UBE2AP49459 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 CIB2-204ENST00000557846 934 ntTSL 3 BASIC15.82■□□□□ 0.12
UBE2AP49459 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC15.82■□□□□ 0.12
UBE2AP49459 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2AP49459 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBE2AP49459 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2AP49459 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC15.81■□□□□ 0.12
UBE2AP49459 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC15.81■□□□□ 0.12
UBE2AP49459 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2AP49459 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 AC044849.2-201ENST00000606596 710 ntBASIC15.8■□□□□ 0.12
UBE2AP49459 MIR6090-201ENST00000622481 60 ntBASIC15.8■□□□□ 0.12
UBE2AP49459 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC15.8■□□□□ 0.12
UBE2AP49459 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2AP49459 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBE2AP49459 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBE2AP49459 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBE2AP49459 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBE2AP49459 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBE2AP49459 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBE2AP49459 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
UBE2AP49459 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
UBE2AP49459 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
UBE2AP49459 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
UBE2AP49459 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC15.78■□□□□ 0.12
UBE2AP49459 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms