Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP3CBP16298 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP3CBP16298 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP3CBP16298 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP3CBP16298 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP3CBP16298 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP3CBP16298 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP3CBP16298 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PPP3CBP16298 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP3CBP16298 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP3CBP16298 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP3CBP16298 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP3CBP16298 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP3CBP16298 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PPP3CBP16298 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.53■■□□□ 1.2
PPP3CBP16298 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP3CBP16298 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PPP3CBP16298 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP3CBP16298 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.52■■□□□ 1.2
PPP3CBP16298 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP3CBP16298 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP3CBP16298 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 HSD17B1P1-201ENST00000590052 955 ntBASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP3CBP16298 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PPP3CBP16298 AC135983.2-203ENST00000454486 1613 ntBASIC22.5■■□□□ 1.19
PPP3CBP16298 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP3CBP16298 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP3CBP16298 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.5■■□□□ 1.19
PPP3CBP16298 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PPP3CBP16298 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.49■■□□□ 1.19
PPP3CBP16298 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP3CBP16298 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP3CBP16298 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PPP3CBP16298 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP3CBP16298 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP3CBP16298 AC008813.1-201ENST00000536597 885 ntBASIC22.48■■□□□ 1.19
PPP3CBP16298 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP3CBP16298 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP3CBP16298 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PPP3CBP16298 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP3CBP16298 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP3CBP16298 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PPP3CBP16298 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP3CBP16298 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP3CBP16298 ST7-AS1-201ENST00000456775 1889 ntBASIC22.46■■□□□ 1.19
PPP3CBP16298 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.46■■□□□ 1.19
PPP3CBP16298 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP3CBP16298 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
PPP3CBP16298 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
PPP3CBP16298 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PPP3CBP16298 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PPP3CBP16298 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.45■■□□□ 1.18
PPP3CBP16298 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
PPP3CBP16298 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.45■■□□□ 1.18
PPP3CBP16298 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP3CBP16298 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP3CBP16298 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP3CBP16298 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.44■■□□□ 1.18
PPP3CBP16298 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP3CBP16298 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.43■■□□□ 1.18
PPP3CBP16298 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
PPP3CBP16298 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.43■■□□□ 1.18
PPP3CBP16298 WHAMMP2-203ENST00000563942 1603 ntBASIC22.43■■□□□ 1.18
PPP3CBP16298 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP3CBP16298 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP3CBP16298 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PPP3CBP16298 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.43■■□□□ 1.18
PPP3CBP16298 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PPP3CBP16298 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PPP3CBP16298 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP3CBP16298 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PPP3CBP16298 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PPP3CBP16298 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.42■■□□□ 1.18
PPP3CBP16298 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.42■■□□□ 1.18
PPP3CBP16298 AC142086.6-201ENST00000621154 1765 ntBASIC22.42■■□□□ 1.18
PPP3CBP16298 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP3CBP16298 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PPP3CBP16298 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
PPP3CBP16298 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.41■■□□□ 1.18
PPP3CBP16298 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.41■■□□□ 1.18
PPP3CBP16298 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.4■■□□□ 1.18
PPP3CBP16298 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.4■■□□□ 1.18
PPP3CBP16298 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP3CBP16298 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP3CBP16298 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PPP3CBP16298 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.39■■□□□ 1.17
PPP3CBP16298 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
PPP3CBP16298 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP3CBP16298 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PPP3CBP16298 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.38■■□□□ 1.17
PPP3CBP16298 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PPP3CBP16298 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PPP3CBP16298 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms