Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.79■■■□□ 2.68
SRGAP3O43295 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SRGAP3O43295 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SRGAP3O43295 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.79■■■□□ 2.68
SRGAP3O43295 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.79■■■□□ 2.68
SRGAP3O43295 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SRGAP3O43295 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SRGAP3O43295 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SRGAP3O43295 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.78■■■□□ 2.68
SRGAP3O43295 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SRGAP3O43295 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.77■■■□□ 2.68
SRGAP3O43295 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.77■■■□□ 2.68
SRGAP3O43295 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.76■■■□□ 2.68
SRGAP3O43295 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SRGAP3O43295 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SRGAP3O43295 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.76■■■□□ 2.67
SRGAP3O43295 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SRGAP3O43295 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SRGAP3O43295 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SRGAP3O43295 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SRGAP3O43295 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SRGAP3O43295 HLA-V-202ENST00000446817 847 ntBASIC31.74■■■□□ 2.67
SRGAP3O43295 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
SRGAP3O43295 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SRGAP3O43295 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SRGAP3O43295 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SRGAP3O43295 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SRGAP3O43295 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SRGAP3O43295 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SRGAP3O43295 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SRGAP3O43295 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SRGAP3O43295 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SRGAP3O43295 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SRGAP3O43295 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
SRGAP3O43295 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
SRGAP3O43295 MIR639-201ENST00000384974 98 ntBASIC31.7■■■□□ 2.67
SRGAP3O43295 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SRGAP3O43295 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
SRGAP3O43295 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.68■■■□□ 2.66
SRGAP3O43295 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SRGAP3O43295 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
SRGAP3O43295 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.68■■■□□ 2.66
SRGAP3O43295 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.67■■■□□ 2.66
SRGAP3O43295 DRD5P2-201ENST00000421395 2012 ntBASIC31.66■■■□□ 2.66
SRGAP3O43295 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SRGAP3O43295 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SRGAP3O43295 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SRGAP3O43295 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.65■■■□□ 2.66
SRGAP3O43295 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.65■■■□□ 2.66
SRGAP3O43295 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
SRGAP3O43295 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SRGAP3O43295 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SRGAP3O43295 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.64■■■□□ 2.66
SRGAP3O43295 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.63■■■□□ 2.65
SRGAP3O43295 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SRGAP3O43295 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SRGAP3O43295 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
SRGAP3O43295 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
SRGAP3O43295 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SRGAP3O43295 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SRGAP3O43295 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
SRGAP3O43295 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
SRGAP3O43295 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SRGAP3O43295 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SRGAP3O43295 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SRGAP3O43295 AP002414.2-202ENST00000590929 1450 ntBASIC31.59■■■□□ 2.65
SRGAP3O43295 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SRGAP3O43295 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SRGAP3O43295 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SRGAP3O43295 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SRGAP3O43295 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SRGAP3O43295 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
SRGAP3O43295 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.56■■■□□ 2.64
SRGAP3O43295 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SRGAP3O43295 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SRGAP3O43295 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SRGAP3O43295 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SRGAP3O43295 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SRGAP3O43295 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SRGAP3O43295 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SRGAP3O43295 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.55■■■□□ 2.64
SRGAP3O43295 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SRGAP3O43295 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.53■■■□□ 2.64
SRGAP3O43295 AC008813.1-201ENST00000536597 885 ntBASIC31.53■■■□□ 2.64
SRGAP3O43295 MIR4449-201ENST00000578365 66 ntBASIC31.53■■■□□ 2.64
SRGAP3O43295 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
SRGAP3O43295 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SRGAP3O43295 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.51■■■□□ 2.64
SRGAP3O43295 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SRGAP3O43295 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SRGAP3O43295 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
SRGAP3O43295 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
SRGAP3O43295 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SRGAP3O43295 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SRGAP3O43295 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SRGAP3O43295 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SRGAP3O43295 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.48■■■□□ 2.63
SRGAP3O43295 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.48■■■□□ 2.63
SRGAP3O43295 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.48■■■□□ 2.63
SRGAP3O43295 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms