Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COLCA2A8K830 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COLCA2A8K830 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA2A8K830 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA2A8K830 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COLCA2A8K830 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COLCA2A8K830 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA2A8K830 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COLCA2A8K830 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA2A8K830 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA2A8K830 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA2A8K830 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COLCA2A8K830 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COLCA2A8K830 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA2A8K830 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COLCA2A8K830 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA2A8K830 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COLCA2A8K830 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA2A8K830 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA2A8K830 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.86■□□□□ 0.77
COLCA2A8K830 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COLCA2A8K830 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA2A8K830 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA2A8K830 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA2A8K830 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COLCA2A8K830 AC079834.2-201ENST00000609776 1949 ntBASIC19.84■□□□□ 0.77
COLCA2A8K830 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COLCA2A8K830 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA2A8K830 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COLCA2A8K830 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COLCA2A8K830 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.83■□□□□ 0.77
COLCA2A8K830 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA2A8K830 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
COLCA2A8K830 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COLCA2A8K830 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COLCA2A8K830 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.82■□□□□ 0.76
COLCA2A8K830 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.82■□□□□ 0.76
COLCA2A8K830 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COLCA2A8K830 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COLCA2A8K830 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.81■□□□□ 0.76
COLCA2A8K830 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COLCA2A8K830 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.81■□□□□ 0.76
COLCA2A8K830 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COLCA2A8K830 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COLCA2A8K830 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COLCA2A8K830 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA2A8K830 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA2A8K830 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA2A8K830 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COLCA2A8K830 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA2A8K830 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COLCA2A8K830 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.79■□□□□ 0.76
COLCA2A8K830 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA2A8K830 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA2A8K830 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA2A8K830 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA2A8K830 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COLCA2A8K830 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.78■□□□□ 0.76
COLCA2A8K830 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COLCA2A8K830 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA2A8K830 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA2A8K830 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
COLCA2A8K830 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COLCA2A8K830 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA2A8K830 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COLCA2A8K830 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COLCA2A8K830 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COLCA2A8K830 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COLCA2A8K830 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA2A8K830 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA2A8K830 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA2A8K830 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA2A8K830 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COLCA2A8K830 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA2A8K830 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COLCA2A8K830 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.75■□□□□ 0.75
COLCA2A8K830 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA2A8K830 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.74■□□□□ 0.75
COLCA2A8K830 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.74■□□□□ 0.75
COLCA2A8K830 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COLCA2A8K830 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA2A8K830 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COLCA2A8K830 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.72■□□□□ 0.75
COLCA2A8K830 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.72■□□□□ 0.75
COLCA2A8K830 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COLCA2A8K830 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA2A8K830 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA2A8K830 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COLCA2A8K830 LINC01003-201ENST00000564834 1764 ntBASIC19.71■□□□□ 0.75
COLCA2A8K830 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA2A8K830 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.7■□□□□ 0.74
COLCA2A8K830 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COLCA2A8K830 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.7■□□□□ 0.74
COLCA2A8K830 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA2A8K830 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA2A8K830 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA2A8K830 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COLCA2A8K830 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA2A8K830 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COLCA2A8K830 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms