Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-1A0A0K0K1D8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 AC018358.1-201ENST00000631079 1402 ntBASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV6-1A0A0K0K1D8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TRBV6-1A0A0K0K1D8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-1A0A0K0K1D8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-1A0A0K0K1D8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-1A0A0K0K1D8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-1A0A0K0K1D8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV6-1A0A0K0K1D8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV6-1A0A0K0K1D8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-1A0A0K0K1D8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-1A0A0K0K1D8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-1A0A0K0K1D8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19■□□□□ 0.63
TRBV6-1A0A0K0K1D8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRBV6-1A0A0K0K1D8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV6-1A0A0K0K1D8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-1A0A0K0K1D8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-1A0A0K0K1D8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV6-1A0A0K0K1D8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV6-1A0A0K0K1D8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-1A0A0K0K1D8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.98■□□□□ 0.63
TRBV6-1A0A0K0K1D8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRBV6-1A0A0K0K1D8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-1A0A0K0K1D8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRBV6-1A0A0K0K1D8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-1A0A0K0K1D8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV6-1A0A0K0K1D8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-1A0A0K0K1D8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-1A0A0K0K1D8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-1A0A0K0K1D8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV6-1A0A0K0K1D8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV6-1A0A0K0K1D8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV6-1A0A0K0K1D8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-1A0A0K0K1D8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV6-1A0A0K0K1D8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-1A0A0K0K1D8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-1A0A0K0K1D8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-1A0A0K0K1D8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AC020928.2-201ENST00000588717 2197 ntBASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 DUSP8P4-201ENST00000399538 1761 ntBASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV6-1A0A0K0K1D8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-1A0A0K0K1D8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-1A0A0K0K1D8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-1A0A0K0K1D8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.9■□□□□ 0.62
TRBV6-1A0A0K0K1D8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRBV6-1A0A0K0K1D8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV6-1A0A0K0K1D8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV6-1A0A0K0K1D8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV6-1A0A0K0K1D8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-1A0A0K0K1D8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-1A0A0K0K1D8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV6-1A0A0K0K1D8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-1A0A0K0K1D8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-1A0A0K0K1D8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms