Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV9-1A0A075B6T8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRAV9-1A0A075B6T8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV9-1A0A075B6T8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV9-1A0A075B6T8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-1A0A075B6T8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-1A0A075B6T8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-1A0A075B6T8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV9-1A0A075B6T8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV9-1A0A075B6T8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV9-1A0A075B6T8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV9-1A0A075B6T8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV9-1A0A075B6T8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV9-1A0A075B6T8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV9-1A0A075B6T8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-1A0A075B6T8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-1A0A075B6T8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV9-1A0A075B6T8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV9-1A0A075B6T8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV9-1A0A075B6T8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRAV9-1A0A075B6T8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRAV9-1A0A075B6T8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV9-1A0A075B6T8 DUSP8P4-201ENST00000399538 1761 ntBASIC19.09■□□□□ 0.65
TRAV9-1A0A075B6T8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.08■□□□□ 0.65
TRAV9-1A0A075B6T8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV9-1A0A075B6T8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV9-1A0A075B6T8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV9-1A0A075B6T8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV9-1A0A075B6T8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV9-1A0A075B6T8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV9-1A0A075B6T8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV9-1A0A075B6T8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV9-1A0A075B6T8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRAV9-1A0A075B6T8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV9-1A0A075B6T8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV9-1A0A075B6T8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV9-1A0A075B6T8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV9-1A0A075B6T8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV9-1A0A075B6T8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-1A0A075B6T8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV9-1A0A075B6T8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-1A0A075B6T8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV9-1A0A075B6T8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV9-1A0A075B6T8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV9-1A0A075B6T8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV9-1A0A075B6T8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.02■□□□□ 0.63
TRAV9-1A0A075B6T8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 AC010864.1-201ENST00000609407 1511 ntBASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV9-1A0A075B6T8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRAV9-1A0A075B6T8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV9-1A0A075B6T8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV9-1A0A075B6T8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms