Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC007663.1-201ENST00000438948 1240 ntBASIC20.26■□□□□ 0.83
CDH9Q9ULB4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 FAM87A-204ENST00000613235 858 ntBASIC20.26■□□□□ 0.83
CDH9Q9ULB4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH9Q9ULB4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.25■□□□□ 0.83
CDH9Q9ULB4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 AC005521.1-201ENST00000393351 872 ntBASIC20.25■□□□□ 0.83
CDH9Q9ULB4 KRT18P21-201ENST00000515767 1272 ntBASIC20.25■□□□□ 0.83
CDH9Q9ULB4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH9Q9ULB4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 HMGA1P5-201ENST00000412453 271 ntBASIC20.24■□□□□ 0.83
CDH9Q9ULB4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH9Q9ULB4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 TEX21P-204ENST00000641479 1693 ntBASIC20.23■□□□□ 0.83
CDH9Q9ULB4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 TERF1P1-201ENST00000311003 1181 ntBASIC20.23■□□□□ 0.83
CDH9Q9ULB4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 AL137013.1-201ENST00000432946 1228 ntBASIC20.23■□□□□ 0.83
CDH9Q9ULB4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH9Q9ULB4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 AC092865.7-201ENST00000641832 219 ntBASIC20.22■□□□□ 0.83
CDH9Q9ULB4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH9Q9ULB4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 AC073508.3-201ENST00000619697 1419 ntBASIC20.21■□□□□ 0.83
CDH9Q9ULB4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms