Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.5■□□□□ 0.87
TIFAQ96CG3 TOB2P1-201ENST00000469761 992 ntBASIC20.5■□□□□ 0.87
TIFAQ96CG3 AC092183.1-201ENST00000469884 875 ntBASIC20.5■□□□□ 0.87
TIFAQ96CG3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.5■□□□□ 0.87
TIFAQ96CG3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.5■□□□□ 0.87
TIFAQ96CG3 AC024243.1-201ENST00000609234 778 ntBASIC20.5■□□□□ 0.87
TIFAQ96CG3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.5■□□□□ 0.87
TIFAQ96CG3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIFAQ96CG3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIFAQ96CG3 PLK5-205ENST00000642079 1969 ntBASIC20.5■□□□□ 0.87
TIFAQ96CG3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.5■□□□□ 0.87
TIFAQ96CG3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 MIR574-201ENST00000385209 96 ntBASIC20.49■□□□□ 0.87
TIFAQ96CG3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 KRT16P4-201ENST00000453883 522 ntBASIC20.49■□□□□ 0.87
TIFAQ96CG3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.49■□□□□ 0.87
TIFAQ96CG3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIFAQ96CG3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 MIR1233-2-201ENST00000408138 82 ntBASIC20.48■□□□□ 0.87
TIFAQ96CG3 MIR1233-1-201ENST00000408722 82 ntBASIC20.48■□□□□ 0.87
TIFAQ96CG3 TSPY12P-201ENST00000421279 868 ntBASIC20.48■□□□□ 0.87
TIFAQ96CG3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.48■□□□□ 0.87
TIFAQ96CG3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TIFAQ96CG3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIFAQ96CG3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TIFAQ96CG3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.47■□□□□ 0.87
TIFAQ96CG3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TIFAQ96CG3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIFAQ96CG3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIFAQ96CG3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 AC092865.5-201ENST00000545435 363 ntBASIC20.46■□□□□ 0.87
TIFAQ96CG3 AC138894.3-201ENST00000603787 634 ntBASIC20.46■□□□□ 0.87
TIFAQ96CG3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 AL353801.3-201ENST00000609898 542 ntBASIC20.46■□□□□ 0.87
TIFAQ96CG3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.46■□□□□ 0.87
TIFAQ96CG3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIFAQ96CG3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TIFAQ96CG3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TIFAQ96CG3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TIFAQ96CG3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.45■□□□□ 0.86
TIFAQ96CG3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms