Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE8Q86YQ8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE8Q86YQ8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 FEM1AP3-201ENST00000403722 1741 ntBASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 PRKY-204ENST00000533551 1019 ntBASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 AL512353.2-201ENST00000448759 1962 ntBASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE8Q86YQ8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 KRT17P3-201ENST00000420566 1262 ntBASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 TSPY23P-201ENST00000440136 739 ntBASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 AC073648.6-201ENST00000641589 218 ntBASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE8Q86YQ8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms